fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G02030 C2H2-like zinc finger protein (.1)

>AT1G02030.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 685, 747
EcoRI G|AATTC 709
EcoRV GAT|ATC 289
NcoI C|CATGG 128
SpeI A|CTAGT 613
StyI C|C[AT][AT]GG 128


Click here to view TAIR data

>AT1G02030.1 length:804
ATGGAAGAGA GGCATAAGTG CAAGTTATGT TGGAAGAGCT TCGCTAATGG 
50
AAGGGCTTTG GGAGGTCACA TGAGGTCTCA CATGCTCATT CACCCTCTCC 
100
CCAGTCAGCC CGAGTCATAT TCGTCTTCCA TGGCTGATCC AGGGTTTGTT 
150
CTTCAGGACA GAGAGAGTGA AACCGAGTCG TCCAAGAAGC CCTCCCGCAA 
200
ACGATCCAGA CTTAACCGGA GATCCATCTC ATCATTACGT CATCAACAAT 
250
CCAACGAAGA AGGGAAAAGT GAAACCGCAA GAGCAGCAGA TATCAAGATC 
300
GGGGTTCAAG AACTCAGTGA GTCGTGTACG GAGCAGGAAC CGATGAGTTC 
350
GGTGTCGGAC GCTGCAACAA CGGAAGAAGA CGTGGCCTTG AGTCTCATGT 
400
TGCTGTCGAG AGACAAGTGG GAGAAGGAGG AAGAGGAAAG TGATGAAGAG 
450
AGATGGAAGA AGAAGAGGAA TAAGTGGTTC GAGTGCGAGA CTTGCGAGAA 
500
AGTGTTTAAG TCGTATCAGG CGTTAGGGGG ACACAGAGCA AGCCACAAGA 
550
AGAAGATAGC AGAAACAGAT CAATTAGGCT CAGATGAGTT GAAGAAGAAG 
600
AAGAAGAAGA GTACTAGTAG TCACCATGAA TGTCCAATCT GTGCCAAAGT 
650
CTTCACATCT GGTCAAGCTC TCGGAGGTCA CAAAAGATCT CACGCTTCCG 
700
CTAATAATGA ATTCACGAGA AGATCAGGAA TAATAATTAG CTTGATAGAT 
750
CTAAATCTCC CAGCGCCATC GGAGGAGGAA GAGATGGCCT CGTCGGTTTT 
800
TTAA
850

>AT1G02030.1 longest ORF length:267
MEERHKCKLC WKSFANGRAL GGHMRSHMLI HPLPSQPESY SSSMADPGFV 
50
LQDRESETES SKKPSRKRSR LNRRSISSLR HQQSNEEGKS ETARAADIKI 
100
GVQELSESCT EQEPMSSVSD AATTEEDVAL SLMLLSRDKW EKEEEESDEE 
150
RWKKKRNKWF ECETCEKVFK SYQALGGHRA SHKKKIAETD QLGSDELKKK 
200
KKKSTSSHHE CPICAKVFTS GQALGGHKRS HASANNEFTR RSGIIISLID 
250
LNLPAPSEEE EMASSVF
300