fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus	Common name	Short description
AT1G02040		C2H2-type zinc finger family protein (.1)

>AT1G02040.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI

Name	Recognition sequence	Cut positions
HindIII	A\|AGCTT	458

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>AT1G02040.1 length:975

ATGCATGTGA CTAGGAATGT TGGAAAAAGT CAAAAGTTGC ACCACGTGTC	50
GTTAAAGCAA GTGCTTAGCT ACTTGGAACC ACATGAACAA GAAGACACCA	100
AACCCGTTAC TTCCACTAAA AACAAGGGCT TTCTTCTTTT TAATTCACAC	150
CAAAACACTT TGAACACACA CATGCATGGA GCCATGAACT CACCATGCAT	200
TGATTTCGTA ATGTTCAGTC GTGGACAACA CGATGAGGAC AACATGTCAC	250
GTCGTCCTCC GTGGAAGAGG GAGAGATCGA TGTCCACTCA GCATCATCAT	300
CTTAACTTGT CTCCAAACGA AGACGAAGAG CTTGCCAACT GTCTTGTCTT	350
GTTGTCCAAT TCAGGGGATG CGCATGGTGG TGATCAGCAT AAACAACATG	400
GACATGGTAA GGGCAAAACC GTCAAAAAGC AAAAAACCGC CCAGGTTTTC	450
CAATGCAAAG CTTGCAAGAA GGTGTTCACG TCGCATCAGG CATTGGGTGG	500
ACACAGGGCA AGCCACAAGA AAGTGAAGGG TTGTTTTGCC TCTCAAGATA	550
AAGAAGAGGA AGAGGAAGAG GAATACAAAG AAGACGACGA CGACAACGAC	600
GAGGACGAAG ATGAGGAGGA GGATGAGGAA GACAAATCAA CGGCTCATAT	650
CGCAAGAAAG AGATCCAACG CTCACGAATG CACCATCTGC CATCGCGTCT	700
TCTCTTCGGG ACAGGCCTTA GGAGGCCACA AGCGATGCCA TTGGCTAACA	750
CCTTCCAATT ATCTTCGTAT GACGTCGCTC CACGATCATC ATCATTCCGT	800
CGGCAGACCG CAGCCGTTAG ATCAACCATC TCTCGATCTC AACTTAGCTT	850
GCCAAGAATA TTCCGTCGAT CCAACGGCCA TGAGCGTAGG GATGATCGAG	900
AGAGATGGTG GTGGCAATAA TCACAACGCT ACTTCATCTT CGTGGTTAAA	950
ACTCGCAAGT GGTGATTGGT CTTGA	1000

>AT1G02040.1 longest ORF length:324

MHVTRNVGKS QKLHHVSLKQ VLSYLEPHEQ EDTKPVTSTK NKGFLLFNSH	50
QNTLNTHMHG AMNSPCIDFV MFSRGQHDED NMSRRPPWKR ERSMSTQHHH	100
LNLSPNEDEE LANCLVLLSN SGDAHGGDQH KQHGHGKGKT VKKQKTAQVF	150
QCKACKKVFT SHQALGGHRA SHKKVKGCFA SQDKEEEEEE EYKEDDDDND	200
EDEDEEEDEE DKSTAHIARK RSNAHECTIC HRVFSSGQAL GGHKRCHWLT	250
PSNYLRMTSL HDHHHSVGRP QPLDQPSLDL NLACQEYSVD PTAMSVGMIE	300
RDGGGNNHNA TSSSWLKLAS GDWS	350