fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G02065 SPL8 squamosa promoter binding protein-like 8 (.1.2)

>AT1G02065.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 376
EcoRI G|AATTC 631, 718
EcoRV GAT|ATC 900


Click here to view TAIR data

>AT1G02065.1 length:1002
ATGTTGGACT ACGAATGGGA TAATCCTTCC TCCATCGTTC TCTCCGGAGA 
50
TGAAAGAAAC CCGGACTCTG ACCCGACCCG GTCATCCTTC TCCTTTTTCG 
100
ACCCCATCTC CCATTACAAC AACGACCACC GTCACATCAC CATTTCTCCT 
150
CCCCTCCTCT CTTCCTTCTC TAACCAACAA CAACAGCATC ACCTCACCCT 
200
CTACGGTCAG ACCAACAGCA ACAACCAGTT TCTTCATCAT CACCATCACC 
250
ACCACTCCTT GTACGGGTCC ACCACCACCA CCACTCCTTA CGGCGCCTCC 
300
GATCCCATCT ACCATCCCCA CTCTTCCGCT CCGCCAGCCT CCTTGTTCTC 
350
CTACGACCAG ACAGGACCGG GCTCGGGATC CGGATCTTCC TACAACTTCC 
400
TCATCCCCAA GACAGAAGTG GATTTCACGT CCAACAGGAT CGGGCTGAAC 
450
CTGGGAGGCC GTACGTACTT CTCAGCGGCG GACGACGACT TCGTGAGCAG 
500
GCTATACAGG AGGTCTCGAC CAGGTGAGTC AGGGATGGCG AACTCGCTGA 
550
GCACGCCGCG GTGCCAAGCA GAGGGATGCA ACGCGGATCT GAGCCACGCG 
600
AAACACTACC ACAGAAGGCA CAAAGTGTGC GAATTCCACT CAAAAGCATC 
650
GACGGTTGTA GCCGCCGGAC TAAGCCAAAG GTTTTGCCAG CAATGCAGCA 
700
GGTTCCATTT GCTGTCGGAA TTCGACAACG GGAAACGGAG CTGCCGTAAG 
750
CGACTTGCTG ACCATAACCG CCGCCGCCGT AAATGTCACC AATCAGCCTC 
800
CGCCACCCAA GACACCGGCA CCGGCAAGAC TACTCCAAAG TCACCGAACG 
850
ATTCGGGTGT TAAAGCGTCA TCGTCACCGT CGTCCAACGC GCCGCCTACG 
900
ATATCACTGG AGTGCTTCCG GCAAAGGCAG TTCCAAACGA CAGCGTCTTC 
950
ATCCACGTCA GCGTCTTCGT CTTCAAATTC AATGTTTTTC TCCAGCGGAT 
1000
AG
1050

>AT1G02065.1 longest ORF length:333
MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP 
50
PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS 
100
DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN 
150
LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA 
200
KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFHLLSE FDNGKRSCRK 
250
RLADHNRRRR KCHQSASATQ DTGTGKTTPK SPNDSGVKAS SSPSSNAPPT 
300
ISLECFRQRQ FQTTASSSTS ASSSSNSMFF SSG
350