fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G02065 SPL8 squamosa promoter binding protein-like 8 (.1.2)

>AT1G02065.2 CDS map

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Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 376
EcoRI G|AATTC 631


Click here to view TAIR data

>AT1G02065.2 length:741
ATGTTGGACT ACGAATGGGA TAATCCTTCC TCCATCGTTC TCTCCGGAGA 
50
TGAAAGAAAC CCGGACTCTG ACCCGACCCG GTCATCCTTC TCCTTTTTCG 
100
ACCCCATCTC CCATTACAAC AACGACCACC GTCACATCAC CATTTCTCCT 
150
CCCCTCCTCT CTTCCTTCTC TAACCAACAA CAACAGCATC ACCTCACCCT 
200
CTACGGTCAG ACCAACAGCA ACAACCAGTT TCTTCATCAT CACCATCACC 
250
ACCACTCCTT GTACGGGTCC ACCACCACCA CCACTCCTTA CGGCGCCTCC 
300
GATCCCATCT ACCATCCCCA CTCTTCCGCT CCGCCAGCCT CCTTGTTCTC 
350
CTACGACCAG ACAGGACCGG GCTCGGGATC CGGATCTTCC TACAACTTCC 
400
TCATCCCCAA GACAGAAGTG GATTTCACGT CCAACAGGAT CGGGCTGAAC 
450
CTGGGAGGCC GTACGTACTT CTCAGCGGCG GACGACGACT TCGTGAGCAG 
500
GCTATACAGG AGGTCTCGAC CAGGTGAGTC AGGGATGGCG AACTCGCTGA 
550
GCACGCCGCG GTGCCAAGCA GAGGGATGCA ACGCGGATCT GAGCCACGCG 
600
AAACACTACC ACAGAAGGCA CAAAGTGTGC GAATTCCACT CAAAAGCATC 
650
GACGGTTGTA GCCGCCGGAC TAAGCCAAAG GTTTTGCCAG CAATGCAGCA 
700
GGTTTGTGCC CCCTAAAGTT GCCACCTTTG ACCTTTTTTA A
750

>AT1G02065.2 longest ORF length:246
MLDYEWDNPS SIVLSGDERN PDSDPTRSSF SFFDPISHYN NDHRHITISP 
50
PLLSSFSNQQ QQHHLTLYGQ TNSNNQFLHH HHHHHSLYGS TTTTTPYGAS 
100
DPIYHPHSSA PPASLFSYDQ TGPGSGSGSS YNFLIPKTEV DFTSNRIGLN 
150
LGGRTYFSAA DDDFVSRLYR RSRPGESGMA NSLSTPRCQA EGCNADLSHA 
200
KHYHRRHKVC EFHSKASTVV AAGLSQRFCQ QCSRFVPPKV ATFDLF
250