fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G02220 ANAC003 NAC domain containing protein 3 (.1)

>AT1G02220.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 550
StyI C|C[AT][AT]GG 139


Click here to view TAIR data

>AT1G02220.1 length:1185
ATGGAAACTC CTGTGGGTTT AAGATTCTGT CCGACCGACG AGGAGATCGT 
50
CGTCGATTAC CTTTGGCCGA AAAATTCCGA TAGAGACACG AGCCATGTCG 
100
ATCGATTCAT TAACACAGTC CCTGTCTGTA GACTCGATCC TTGGGAGTTA 
150
CCTTGCCAGT CAAGGATCAA ACTGAAAGAT GTGGCTTGGT GTTTCTTCAG 
200
ACCTAAGGAG AACAAATATG GCAGAGGTGA TCAGCAGATG AGAAAAACGA 
250
AATCTGGGTT TTGGAAGAGT ACTGGCAGAC CAAAGCCTAT CATGCGTAAT 
300
CGCCAACAGA TCGGTGAGAA AAAGATTTTG ATGTTTTACA CGAGTAAGGA 
350
ATCCAAATCC GATTGGGTTA TACACGAGTA CCACGGTTTC TCTCATAACC 
400
AGATGATGAT GACATACACA CTCTGTAAAG TTATGTTTAA TGGTGGCATG 
450
AGAGAGAAGT CTTCCTCTTC TCCTTCTTCT TCTGGTGTTA GTGGAATTGA 
500
GCAGAGTCGT CGTGACTCTT TAATCCCTCA GCTTGTCAAC AATTCTGAGG 
550
GATCCTCACT TCACAGAGAA GATCCAAGTC AGTTTGGTGA TGTGCTGCAA 
600
GAAGCTCCAA TCGAGGATGC TAAACTGACC GAGGAATTGG TAAAATGGCT 
650
GATGAATGAT GAGGATGATG CTCAAATCGA GGATGCTATA CCGATTGAGG 
700
AATGGGAAAC ATGGTTGAAT GATATTGATG ATGCTAAGGA GAAGAGTATC 
750
ATGTTTATGC ATGATAATCG AAGTGATTAC AGACCTCCAA ACTCATTAAC 
800
TGGTGTCTTC AGTGATGATG TTAGCAGTGA TGATAATGAT TCTGATTTGC 
850
TAACTCCAAA AACAAACTCT ATTCAAACTT CGAGCACTTG TGATAGTTTT 
900
GGTAGCTCAA ATCATCGCAT AGACCAGATC AAAGACCTGC AAGAATCTCC 
950
TACCTCAACA ATCAACTTAG TGTCACTAAC TCAAGAGGTG AGCCAAGCTC 
1000
TAATAACCAG TATTGATACC GCCGAGAAGA AGAAGAATCC TTATGATGAT 
1050
GCACAAGGGA CTGAGATTGG TGAGCATAAA TTGGGTCAAG AGACGATCAA 
1100
GAAGAAAAGA GCTGGTTTCT TTCACAGGAT GATACAAAAA TTCGTCAAGA 
1150
AAATTCACCT ATGTTCTTCC ATCTCAAGAA CTTGA
1200

>AT1G02220.1 longest ORF length:394
METPVGLRFC PTDEEIVVDY LWPKNSDRDT SHVDRFINTV PVCRLDPWEL 
50
PCQSRIKLKD VAWCFFRPKE NKYGRGDQQM RKTKSGFWKS TGRPKPIMRN 
100
RQQIGEKKIL MFYTSKESKS DWVIHEYHGF SHNQMMMTYT LCKVMFNGGM 
150
REKSSSSPSS SGVSGIEQSR RDSLIPQLVN NSEGSSLHRE DPSQFGDVLQ 
200
EAPIEDAKLT EELVKWLMND EDDAQIEDAI PIEEWETWLN DIDDAKEKSI 
250
MFMHDNRSDY RPPNSLTGVF SDDVSSDDND SDLLTPKTNS IQTSSTCDSF 
300
GSSNHRIDQI KDLQESPTST INLVSLTQEV SQALITSIDT AEKKKNPYDD 
350
AQGTEIGEHK LGQETIKKKR AGFFHRMIQK FVKKIHLCSS ISRT
400