fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G02230 ANAC004 NAC domain containing protein 4 (.1)

>AT1G02230.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, HindIII, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 467
EcoRI G|AATTC 579
EcoRV GAT|ATC 121, 801
HpaI GTT|AAC 750
NheI G|CTAGC 853
SalI G|TCGAC 49
StyI C|C[AT][AT]GG 139, 936


Click here to view TAIR data

>AT1G02230.1 length:1080
ATGATGAATC CGGTGGGTTT CAGATTCCGT CCAAACGACG AGGAGATCGT 
50
CGACCATTAC CTCCGGCCAA AAAATCTCGA TAGTGACACT AGCCATGTCG 
100
ATGAAGTCAT TAGCACAGTC GATATCTGTA GCTTCGAGCC TTGGGATTTA 
150
CCTTCCAAGT CGATGATCAA ATCGAGAGAT GGGGTTTGGT ATTTCTTTAG 
200
TGTTAAGGAG ATGAAGTATA ACAGAGGTGA TCAACAGAGA AGAAGAACAA 
250
ACTCTGGGTT TTGGAAGAAA ACTGGAAAAA CAATGACTGT CATGCGCAAA 
300
AGAGGAAATC GTGAGAAGAT CGGTGAGAAA AGGGTTTTGG TTTTTAAGAA 
350
TCGAGATGGT TCAAAGACCG ACTGGGTTAT GCACGAGTAT CACGCTACGT 
400
CCTTGTTTCC TAATCAGATG ATGACGTATA CAGTCTGCAA AGTTGAGTTT 
450
AAGGGTGAAG AGACAGAGAT CTCTTCTTCT TCTACTGGTA GTGAAATTGA 
500
ACAGATTCAC TCTTTAATCC CTCTTGTGAA CAGTTCTGGA GGATCTGAGG 
550
GTTCGTCGTT TCACAGCCAA GAATTACAGA ATTCAAGTCA GTCTGGTGTC 
600
TTTGCTAATG TGCAGGGAGA ATCTCAAATC GATGATGCAA CTACACCGAT 
650
TGAGGAGGAA TGGAAAACAT GGTTGAATAA TGATGGTGAT GAGCAGAGGA 
700
ATATCATGTT TATGCAAGAT CATCGCAGCG ATTACACACC TCTAAAGTCG 
750
TTAACTGGTG TCTTCAGTGA TGATAGCAGT GATGATAATG ATTCTGATTT 
800
GATATCTCCT AAAACAAATT CTATTGGAAC TTCGAGCACT TGTGCTAGTT 
850
TTGCTAGCTC AAATCATCAG ATAGACCAAA CTCAACATTC TCCTGACTCA 
900
ACAGTCCAGC TAGTGTCATT AACTCAAGAG GTGAGCCAAG GTCCGGGTCA 
950
AGTGACTGTG ATTCGAGAGC ATAAATTGGG TGAAGAGTCT GTCAAGAAGA 
1000
AAAGAGCTAG TTTCGTTTAC AGGATGATAC ACAGATTAGT CAAGAAAATT 
1050
CACCAATGTT ATTCTATCTC AAGAACATGA 
1100

>AT1G02230.1 longest ORF length:359
MMNPVGFRFR PNDEEIVDHY LRPKNLDSDT SHVDEVISTV DICSFEPWDL 
50
PSKSMIKSRD GVWYFFSVKE MKYNRGDQQR RRTNSGFWKK TGKTMTVMRK 
100
RGNREKIGEK RVLVFKNRDG SKTDWVMHEY HATSLFPNQM MTYTVCKVEF 
150
KGEETEISSS STGSEIEQIH SLIPLVNSSG GSEGSSFHSQ ELQNSSQSGV 
200
FANVQGESQI DDATTPIEEE WKTWLNNDGD EQRNIMFMQD HRSDYTPLKS 
250
LTGVFSDDSS DDNDSDLISP KTNSIGTSST CASFASSNHQ IDQTQHSPDS 
300
TVQLVSLTQE VSQGPGQVTV IREHKLGEES VKKKRASFVY RMIHRLVKKI 
350
HQCYSISRT
400