fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G02250 ANAC005 NAC domain containing protein 5 (.1)

>AT1G02250.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 281
SalI G|TCGAC 49
StyI C|C[AT][AT]GG 139, 281


Click here to view TAIR data

>AT1G02250.1 length:1053
ATGGCGAATC CGGTGGGTTT TAGATTCCGT CCGACTGACG GGGAGATCGT 
50
CGACATTTAC CTCCGACCGA AAAATCTCGA AAGTAACACG AGCCATGTCG 
100
ATGAAGTCAT TAGCACAGTT GATATTTGTA GCTTCGACCC TTGGGACTTA 
150
CCTTCCCATT CTAGGATGAA AACAAGAGAT CAGGTTTGGT ATTTCTTCGG 
200
CCGTAAGGAG AACAAATATG GTAAAGGTGA TCGACAGATA AGAAAAACCA 
250
AGTCTGGTTT TTGGAAGAAA ACTGGCGTTA CCATGGATAT AATGCGCAAA 
300
ACGGGAGATC GTGAGAAGAT CGGTGAGAAA AGGGTTTTGG TGTTTAAGAA 
350
TCACGGTGGT TCCAAGTCCG ATTGGGCTAT GCATGAGTAT CACGCTACGT 
400
TCTCGTCTCC TAATCAGGGT GAAAGGAGAG AATTTTCAGT TGCTACTGGT 
450
AGTGGAATTA AGCATACTCA CTCTTTAATC CCTCCTACCA ACAATTCTGG 
500
AGTTTTGAGT GTAGAGACAG AGGGATCGTT GTTTCACAGC CAAGAATCAC 
550
AGAATCCAAG TCAGTTTTCT GGCTTTCTTG ATGTGGATGC ACTAGATAGG 
600
GACTTCTGCA ATATTTTGAG TGATGATTTC AAAGGCTTCT TTAATGATGA 
650
CGATGAGCAG AGTAAGATTG TTTCTATGCA AGATGATCGC AACAACCACA 
700
CACCTCAAAA GCCATTGACC GGTGTCTTCA GTGATCATAG CACCGATGGT 
750
AGTGATTCTG ATCCGATTTC TGCAACAACT ATTTCCATTC AAACTTTAAG 
800
CACTTGTCCT AGTTTTGGTA GCTCAAATCC TCTATACCAA ATCACTGACT 
850
TGCAGGAATC TCCTAACTCA ATCAAGTTAG TGTCATTAGC TCAAGAGGTG 
900
AGCAAAACAC CGGGAACCGG TATTGATAAT GATGCACAAG GGACTGAGAT 
950
TGGTGAGCAT AAATTGGGTC AAGAGACGAT CAAGAACAAA AGAGCTGGTT 
1000
TCTTTCACAG GATGATACAA AAATTCGTCA AGAAAATTCA CCTAAGAACA 
1050
TGA
1100

>AT1G02250.1 longest ORF length:350
MANPVGFRFR PTDGEIVDIY LRPKNLESNT SHVDEVISTV DICSFDPWDL 
50
PSHSRMKTRD QVWYFFGRKE NKYGKGDRQI RKTKSGFWKK TGVTMDIMRK 
100
TGDREKIGEK RVLVFKNHGG SKSDWAMHEY HATFSSPNQG ERREFSVATG 
150
SGIKHTHSLI PPTNNSGVLS VETEGSLFHS QESQNPSQFS GFLDVDALDR 
200
DFCNILSDDF KGFFNDDDEQ SKIVSMQDDR NNHTPQKPLT GVFSDHSTDG 
250
SDSDPISATT ISIQTLSTCP SFGSSNPLYQ ITDLQESPNS IKLVSLAQEV 
300
SKTPGTGIDN DAQGTEIGEH KLGQETIKNK RAGFFHRMIQ KFVKKIHLRT 
350