fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G02340 FBI1, RSF1, REP1, HFR1, bHLH026 REDUCED SENSITIVITY TO FAR-RED LIGHT 1, REDUCED PHYTOCHROME SIGNALING 1, LONG HYPOCOTYL IN FAR-RED, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT1G02340.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 14


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>AT1G02340.1 length:879
ATGTCGAATA ATCAAGCTTT CATGGAATTG GGATGGAGAA ACGACGTCGG 
50
ATCACTTGCT GTGAAAGATC AGGGCATGAT GTCAGAAAGA GCAAGAAGTG 
100
ATGAAGATCG TCTAATCAAC GGTCTAAAAT GGGGCTACGG CTACTTTGAT 
150
CATGATCAAA CTGATAATTA TCTTCAGATT GTTCCAGAGA TTCATAAAGA 
200
AGTAGAAAAT GCGAAGGAGG ATTTATTGGT TGTTGTCCCT GATGAACATT 
250
CTGAAACTGA TGATCATCAT CATATTAAAG ATTTTTCAGA GAGATCAGAT 
300
CATCGATTTT ATCTGAGAAA CAAACATGAG AACCCCAAAA AACGTCGTAT 
350
CCAGGTCTTA AGTAGTGATG ATGAATCGGA GGAGTTTACA AGAGAAGTTC 
400
CTTCAGTTAC TCGAAAAGGT TCCAAGAGAA GAAGAAGAGA CGAGAAGATG 
450
AGTAATAAGA TGCGTAAGCT ACAGCAACTC GTACCTAATT GTCACAAGAC 
500
GGACAAGGTT TCGGTTCTCG ACAAGACCAT AGAGTATATG AAAAACCTTC 
550
AACTTCAACT TCAGATGATG TCAACAGTGG GGGTGAATCC TTATTTTCTT 
600
CCGGCGACAT TAGGATTTGG AATGCACAAC CACATGCTGA CGGCAATGGC 
650
TTCGGCTCAC GGCCTAAATC CGGCGAATCA CATGATGCCA TCGCCGCTAA 
700
TTCCGGCGTT AAATTGGCCA TTACCACCGT TTACTAATAT TTCATTCCCA 
750
CATTCATCTA GTCAATCTCT ATTTCTTACA ACATCATCAC CAGCTTCTTC 
800
TCCTCAGTCT CTTCACGGTT TGGTTCCTTA TTTCCCAAGT TTCTTGGATT 
850
TTTCTTCCCA TGCGATGAGA AGACTATGA
900

>AT1G02340.1 longest ORF length:292
MSNNQAFMEL GWRNDVGSLA VKDQGMMSER ARSDEDRLIN GLKWGYGYFD 
50
HDQTDNYLQI VPEIHKEVEN AKEDLLVVVP DEHSETDDHH HIKDFSERSD 
100
HRFYLRNKHE NPKKRRIQVL SSDDESEEFT REVPSVTRKG SKRRRRDEKM 
150
SNKMRKLQQL VPNCHKTDKV SVLDKTIEYM KNLQLQLQMM STVGVNPYFL 
200
PATLGFGMHN HMLTAMASAH GLNPANHMMP SPLIPALNWP LPPFTNISFP 
250
HSSSQSLFLT TSSPASSPQS LHGLVPYFPS FLDFSSHAMR RL
300