fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G03040 bHLH007 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT1G03040.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
HpaI GTT|AAC 538
NcoI C|CATGG 363
NdeI CA|TATG 190
SpeI A|CTAGT 657
StyI C|C[AT][AT]GG 363


Click here to view TAIR data

>AT1G03040.1 length:909
ATGGCTAATA ACAACAACAT CCCACATGAT AGCATCTCCG ATCCATCTCC 
50
TACCGACGAT TTCTTCGAGC AGATCCTCGG GCTTTCCAAC TTCTCCGGTT 
100
CTTCAGGTTC TGGTCTCTCT GGAATCGGCG GCGTGGGTCC ACCTCCGATG 
150
ATGCTTCAGC TTGGTTCAGG CAACGAAGGG AATCATAATC ATATGGGTGC 
200
CATTGGAGGA GGTGGACCTG TAGGGTTTCA TAATCAGATG TTTCCGTTGG 
250
GATTAAGTCT CGATCAAGGG AAAGGACATG GCTTTCTTAA ACCTGATGAA 
300
ACTGGTAAAC GTTTCCAAGA CGATGTTCTT GATAATCGAT GTTCCTCTAT 
350
GAAACCTATT TTCCATGGGC AGCCAATGTC ACAGCCAGCT CCACCAATGC 
400
CGCATCAACA GTCTACTATT CGGCCTAGAG TTAGGGCTAG GCGAGGTCAA 
450
GCTACCGATC CACATAGCAT CGCTGAGAGG CTCCGAAGGG AAAGAATAGC 
500
AGAACGGATC AGGTCGTTGC AGGAACTTGT ACCTACCGTT AACAAGACAG 
550
ATAGGGCTGC TATGATCGAC GAGATTGTCG ATTATGTAAA GTTTCTCAGG 
600
CTCCAAGTTA AGGTCCTGAG CATGAGCCGT CTTGGTGGAG CCGGTGCTGT 
650
CGCACCACTA GTCACTGAAA TGCCATTATC TTCATCAGTT GAGGATGAGA 
700
CGCAGGCCGT GTGGGAGAAA TGGTCAAACG ATGGGACAGA GAGGCAAGTG 
750
GCTAAGCTGA TGGAAGAAAA CGTTGGAGCA GCGATGCAAC TTTTGCAATC 
800
AAAGGCTCTT TGCATAATGC CGATCTCATT GGCAATGGCG ATTTACCATT 
850
CTCAGCCACC AGACACATCT TCTTCAATCG TCAAACCAGA GATGAATCCT 
900
CCACCGTAG
950

>AT1G03040.1 longest ORF length:302
MANNNNIPHD SISDPSPTDD FFEQILGLSN FSGSSGSGLS GIGGVGPPPM 
50
MLQLGSGNEG NHNHMGAIGG GGPVGFHNQM FPLGLSLDQG KGHGFLKPDE 
100
TGKRFQDDVL DNRCSSMKPI FHGQPMSQPA PPMPHQQSTI RPRVRARRGQ 
150
ATDPHSIAER LRRERIAERI RSLQELVPTV NKTDRAAMID EIVDYVKFLR 
200
LQVKVLSMSR LGGAGAVAPL VTEMPLSSSV EDETQAVWEK WSNDGTERQV 
250
AKLMEENVGA AMQLLQSKAL CIMPISLAMA IYHSQPPDTS SSIVKPEMNP 
300
PP
350