fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G03490 ANAC006 NAC domain containing protein 6 (.1)

>AT1G03490.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 371
HpaI GTT|AAC 415
StyI C|C[AT][AT]GG 130


Click here to view TAIR data

>AT1G03490.1 length:846
ATGAAGATTC TTCCGGTTGG ATCACGGTTT TGTCCGACGG ATCTAGGGTT 
50
GGTGAGGCTT TATCTTCGAA ACAAGGTGGA GAGAAATCAG AGCAGTTTCA 
100
TAACAACTAT GGACATCCAC CAAGACTACC CTTGGCTTCT TCCTCACGTA 
150
AACAATCCTT TGTTCAATAA CAACGAGTGG TACTACTTTG TTCCGCTTAC 
200
TGAACGAGGT GGCAAGATAT TAAGCGTACA CCGGAAGGTA GCCGCAAGAG 
250
GAGGAAGCGA AGGCGGCACT TGGAGAAGCA ACGATGGGAA AAAAGAGATC 
300
AAGGACGGAC ACATGCAAAA GGGTGATGGG TTACGAGCAA GTGATGACCT 
350
CCAAAAGGTT GTCTTGTGTC GGATCCGATA CAAGAAAGAG GCGAACGTCA 
400
ACGAGTTTGG ACTCGTTAAC CATCAGGCTC ATCAGACTCA GGATGCTTTA 
450
ACCGGTTTTG CTGATCAGCT TGAGATGATG CTAGAGGGAC AAGAAGACCG 
500
TGAGCAGAAA GAAGAGGCTG ATTTAACCGG TTTTGCTGAT AGCCTTGAGA 
550
CGATGCTAGA GGGACAAGAA GATCATGAGC AGCCAGAAGA TGCTGATTTA 
600
ACCGGTTTTG CTGATAGCCT TGAGACGATG CTAGAGGGAC ATGAAGATCG 
650
TGAGCAGCCA GAAGAGGCTG AATTAACCGT TACTCAACAA CAACAACAAC 
700
AACAACAACA ACAACAACGT CAAGAAGATT GTGACGTTAC TCAAGAGCAA 
750
GAAAAAGATG ATGTGATGGT ACTGATAAAC AATCCTAATG ATGCCCTCGC 
800
ATTGGGGAAT TATGAGATTA TTGATCTAAC TAGGGTTGAT AAATGA
850

>AT1G03490.1 longest ORF length:281
MKILPVGSRF CPTDLGLVRL YLRNKVERNQ SSFITTMDIH QDYPWLLPHV 
50
NNPLFNNNEW YYFVPLTERG GKILSVHRKV AARGGSEGGT WRSNDGKKEI 
100
KDGHMQKGDG LRASDDLQKV VLCRIRYKKE ANVNEFGLVN HQAHQTQDAL 
150
TGFADQLEMM LEGQEDREQK EEADLTGFAD SLETMLEGQE DHEQPEDADL 
200
TGFADSLETM LEGHEDREQP EEAELTVTQQ QQQQQQQQQR QEDCDVTQEQ 
250
EKDDVMVLIN NPNDALALGN YEIIDLTRVD K
300