Locus |
Common name |
Short description |
AT1G03800 |
AtERF10 |
ARABIDOPSIS THALIANA RF DOMAIN PROTEIN 10, ERF domain protein 10 (.1) |
>AT1G03800.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
555 |
NcoI
| C|CATGG |
178 |
StyI
| C|C[AT][AT]GG |
178 |
Click here to view TAIR data
>AT1G03800.1 length:738
ATGACCACAG AAAAAGAGAA TGTCACTACG GCCGTGGCCG TGAAAGACGG | 50 |
CGGAGAAAAG AGTAAGGAAG TGAGTGACAA GGGCGTAAAG AAGAGAAAGA | 100 |
ATGTAACTAA GGCCCTGGCC GTGAATGACG GCGGAGAAAA GAGTAAGGAA | 150 |
GTGCGTTACA GGGGTGTAAG GAGGAGACCA TGGGGGAGAT ATGCTGCGGA | 200 |
GATCCGTGAT CCGGTAAAGA AAAAACGGGT CTGGCTCGGG TCCTTCAACA | 250 |
CGGGGGAGGA AGCCGCCAGA GCCTACGACT CCGCTGCCAT AAGGTTTCGA | 300 |
GGATCGAAAG CTACTACTAA CTTCCCTCTA ATCGGATACT ATGGGATTTC | 350 |
TTCGGCGACG CCGGTGAACA ACAACCTTTC CGAGACGGTG AGTGATGGAA | 400 |
ATGCCAACCT CCCTCTCGTT GGAGACGATG GGAATGCTTT GGCTTCTCCG | 450 |
GTGAACAACA CCCTTTCCGA AACGGCGCGT GATGGAACAC TTCCATCGGA | 500 |
TTGTCACGAC ATGTTATCTC CGGGGGTGGC TGAAGCGGTT GCTGGATTTT | 550 |
TCTTAGATCT GCCTGAAGTT ATTGCGTTGA AAGAGGAGCT TGATCGAGTT | 600 |
TGTCCTGACC AGTTTGAGTC CATTGATATG GGGTTGACTA TTGGTCCTCA | 650 |
AACCGCCGTG GAAGAGCCTG AGACTTCCTC CGCCGTGGAT TGTAAGCTGC | 700 |
GAATGGAACC GGATCTTGAC CTCAACGCAA GTCCCTAA | 750 |
>AT1G03800.1 longest ORF length:245
MTTEKENVTT AVAVKDGGEK SKEVSDKGVK KRKNVTKALA VNDGGEKSKE | 50 |
VRYRGVRRRP WGRYAAEIRD PVKKKRVWLG SFNTGEEAAR AYDSAAIRFR | 100 |
GSKATTNFPL IGYYGISSAT PVNNNLSETV SDGNANLPLV GDDGNALASP | 150 |
VNNTLSETAR DGTLPSDCHD MLSPGVAEAV AGFFLDLPEV IALKEELDRV | 200 |
CPDQFESIDM GLTIGPQTAV EEPETSSAVD CKLRMEPDLD LNASP | 250 |
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