fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G03800 AtERF10 ARABIDOPSIS THALIANA RF DOMAIN PROTEIN 10, ERF domain protein 10 (.1)

>AT1G03800.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 555
NcoI C|CATGG 178
StyI C|C[AT][AT]GG 178


Click here to view TAIR data

>AT1G03800.1 length:738
ATGACCACAG AAAAAGAGAA TGTCACTACG GCCGTGGCCG TGAAAGACGG 
50
CGGAGAAAAG AGTAAGGAAG TGAGTGACAA GGGCGTAAAG AAGAGAAAGA 
100
ATGTAACTAA GGCCCTGGCC GTGAATGACG GCGGAGAAAA GAGTAAGGAA 
150
GTGCGTTACA GGGGTGTAAG GAGGAGACCA TGGGGGAGAT ATGCTGCGGA 
200
GATCCGTGAT CCGGTAAAGA AAAAACGGGT CTGGCTCGGG TCCTTCAACA 
250
CGGGGGAGGA AGCCGCCAGA GCCTACGACT CCGCTGCCAT AAGGTTTCGA 
300
GGATCGAAAG CTACTACTAA CTTCCCTCTA ATCGGATACT ATGGGATTTC 
350
TTCGGCGACG CCGGTGAACA ACAACCTTTC CGAGACGGTG AGTGATGGAA 
400
ATGCCAACCT CCCTCTCGTT GGAGACGATG GGAATGCTTT GGCTTCTCCG 
450
GTGAACAACA CCCTTTCCGA AACGGCGCGT GATGGAACAC TTCCATCGGA 
500
TTGTCACGAC ATGTTATCTC CGGGGGTGGC TGAAGCGGTT GCTGGATTTT 
550
TCTTAGATCT GCCTGAAGTT ATTGCGTTGA AAGAGGAGCT TGATCGAGTT 
600
TGTCCTGACC AGTTTGAGTC CATTGATATG GGGTTGACTA TTGGTCCTCA 
650
AACCGCCGTG GAAGAGCCTG AGACTTCCTC CGCCGTGGAT TGTAAGCTGC 
700
GAATGGAACC GGATCTTGAC CTCAACGCAA GTCCCTAA
750

>AT1G03800.1 longest ORF length:245
MTTEKENVTT AVAVKDGGEK SKEVSDKGVK KRKNVTKALA VNDGGEKSKE 
50
VRYRGVRRRP WGRYAAEIRD PVKKKRVWLG SFNTGEEAAR AYDSAAIRFR 
100
GSKATTNFPL IGYYGISSAT PVNNNLSETV SDGNANLPLV GDDGNALASP 
150
VNNTLSETAR DGTLPSDCHD MLSPGVAEAV AGFFLDLPEV IALKEELDRV 
200
CPDQFESIDM GLTIGPQTAV EEPETSSAVD CKLRMEPDLD LNASP
250