Locus |
Common name |
Short description |
AT1G04100 |
IAA10 |
indoleacetic acid-induced protein 10 (.1) |
>AT1G04100.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
PvuII
| CAG|CTG |
56 |
SacI
| GAGCT|C |
130 |
StyI
| C|C[AT][AT]GG |
709 |
Click here to view TAIR data
>AT1G04100.1 length:786
ATGAATGGTT TGCAAGAAGT TTGTTCGTCA AGTGGGTCGG TGATGATCGG | 50 |
ACTACCAGCT GAAGAAGACG AAAACGCCGC ACATTCGTCG GAGGATTCAT | 100 |
CTTGCCCCGA CGAGTCAGTG TCAGAGACAG AGCTCGACCT AGCTTTGGGT | 150 |
CTTAGCATTG GTCGTCGGAA GGTTCGATCG TCTTTGTCTT CCTCGTCTTC | 200 |
TTCTCTGACC AGGGAAAGTG GGACCAAACG CTCTGCTGAT TCTTCTCCGG | 250 |
CTGCCGCCTC AAACGCAACC AGACAAGTTG CTGTAGGTTG GCCGCCTCTA | 300 |
CGGACTTACA GAATCAACAG TTTGGTCAAT CAAGCAAAGT CTTTAGCTAC | 350 |
GGAAGGCGGC TTGAGTTCTG GCATTCAAAA GGAGACTACA AAAAGTGTAG | 400 |
TGGTTGCTGC TAAGAACGAT GATGCTTGCT TTATCAAATC GTCCAGGACT | 450 |
TCTATGCTTG TGAAGGTGAC AATGGACGGA GTTATAATTG GAAGGAAGGT | 500 |
TGATCTCAAT GCTCTGGATT CTTATGCAGC CTTAGAGAAA ACTTTGGATC | 550 |
TAATGTTTTT CCAGATTCCT TCTCCTGTAA CAAGATCCAA CACACAAGGA | 600 |
TACAAGACAA TTAAGGAAAC ATGTACTTCG AAATTACTGG ATGGCTCATC | 650 |
GGAATATATC ATAACATATC AAGATAAAGA CGGAGATTGG ATGCTTGTAG | 700 |
GAGATGTTCC TTGGCAGATG TTCCTCGGGT CTGTGACAAG ACTGAGAATC | 750 |
ATGAAGACAT CAATTGGAGC TGGAGTAGGT AAGTAG | 800 |
>AT1G04100.1 longest ORF length:261
MNGLQEVCSS SGSVMIGLPA EEDENAAHSS EDSSCPDESV SETELDLALG | 50 |
LSIGRRKVRS SLSSSSSSLT RESGTKRSAD SSPAAASNAT RQVAVGWPPL | 100 |
RTYRINSLVN QAKSLATEGG LSSGIQKETT KSVVVAAKND DACFIKSSRT | 150 |
SMLVKVTMDG VIIGRKVDLN ALDSYAALEK TLDLMFFQIP SPVTRSNTQG | 200 |
YKTIKETCTS KLLDGSSEYI ITYQDKDGDW MLVGDVPWQM FLGSVTRLRI | 250 |
MKTSIGAGVG K | 300 |
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