fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G04100 IAA10 indoleacetic acid-induced protein 10 (.1)

>AT1G04100.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
PvuII CAG|CTG 56
SacI GAGCT|C 130
StyI C|C[AT][AT]GG 709


Click here to view TAIR data

>AT1G04100.1 length:786
ATGAATGGTT TGCAAGAAGT TTGTTCGTCA AGTGGGTCGG TGATGATCGG 
50
ACTACCAGCT GAAGAAGACG AAAACGCCGC ACATTCGTCG GAGGATTCAT 
100
CTTGCCCCGA CGAGTCAGTG TCAGAGACAG AGCTCGACCT AGCTTTGGGT 
150
CTTAGCATTG GTCGTCGGAA GGTTCGATCG TCTTTGTCTT CCTCGTCTTC 
200
TTCTCTGACC AGGGAAAGTG GGACCAAACG CTCTGCTGAT TCTTCTCCGG 
250
CTGCCGCCTC AAACGCAACC AGACAAGTTG CTGTAGGTTG GCCGCCTCTA 
300
CGGACTTACA GAATCAACAG TTTGGTCAAT CAAGCAAAGT CTTTAGCTAC 
350
GGAAGGCGGC TTGAGTTCTG GCATTCAAAA GGAGACTACA AAAAGTGTAG 
400
TGGTTGCTGC TAAGAACGAT GATGCTTGCT TTATCAAATC GTCCAGGACT 
450
TCTATGCTTG TGAAGGTGAC AATGGACGGA GTTATAATTG GAAGGAAGGT 
500
TGATCTCAAT GCTCTGGATT CTTATGCAGC CTTAGAGAAA ACTTTGGATC 
550
TAATGTTTTT CCAGATTCCT TCTCCTGTAA CAAGATCCAA CACACAAGGA 
600
TACAAGACAA TTAAGGAAAC ATGTACTTCG AAATTACTGG ATGGCTCATC 
650
GGAATATATC ATAACATATC AAGATAAAGA CGGAGATTGG ATGCTTGTAG 
700
GAGATGTTCC TTGGCAGATG TTCCTCGGGT CTGTGACAAG ACTGAGAATC 
750
ATGAAGACAT CAATTGGAGC TGGAGTAGGT AAGTAG
800

>AT1G04100.1 longest ORF length:261
MNGLQEVCSS SGSVMIGLPA EEDENAAHSS EDSSCPDESV SETELDLALG 
50
LSIGRRKVRS SLSSSSSSLT RESGTKRSAD SSPAAASNAT RQVAVGWPPL 
100
RTYRINSLVN QAKSLATEGG LSSGIQKETT KSVVVAAKND DACFIKSSRT 
150
SMLVKVTMDG VIIGRKVDLN ALDSYAALEK TLDLMFFQIP SPVTRSNTQG 
200
YKTIKETCTS KLLDGSSEYI ITYQDKDGDW MLVGDVPWQM FLGSVTRLRI 
250
MKTSIGAGVG K
300