Locus |
Common name |
Short description |
AT1G04250 |
IAA17, AXR3 |
indole-3-acetic acid inducible 17, AUXIN RESISTANT 3, AUX/IAA transcriptional regulator family protein (.1) |
>AT1G04250.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
446 |
StyI
| C|C[AT][AT]GG |
191, 236, 446, 583 |
Click here to view TAIR data
>AT1G04250.1 length:690
ATGATGGGCA GTGTCGAGCT GAATCTGAGG GAGACTGAGC TGTGTCTTGG | 50 |
TCTTCCCGGT GGAGATACAG TGGCTCCGGT AACCGGAAAC AAGAGAGGGT | 100 |
TCTCAGAGAC GGTTGATCTG AAGCTAAATC TGAATAATGA GCCTGCAAAC | 150 |
AAGGAAGGAT CTACGACTCA TGACGTCGTG ACTTTTGATT CCAAGGAGAA | 200 |
GAGTGCTTGT CCTAAAGATC CAGCCAAACC TCCGGCCAAG GCACAAGTTG | 250 |
TGGGATGGCC ACCGGTGAGA TCATACCGGA AGAACGTGAT GGTTTCCTGC | 300 |
CAAAAATCAA GCGGTGGCCC GGAGGCGGCG GCGTTCGTGA AGGTATCAAT | 350 |
GGACGGAGCA CCGTACTTGA GGAAAATCGA TTTGAGGATG TATAAAAGCT | 400 |
ACGATGAGCT TTCTAATGCT TTGTCCAACA TGTTCAGCTC TTTTACCATG | 450 |
GGCAAACATG GAGGAGAAGA AGGAATGATA GACTTCATGA ATGAGAGGAA | 500 |
ATTGATGGAT TTGGTGAATA GCTGGGACTA TGTTCCCTCT TATGAAGACA | 550 |
AAGACGGTGA TTGGATGCTC GTCGGCGACG TTCCTTGGCC AATGTTCGTC | 600 |
GATACATGCA AGCGTTTACG TCTCATGAAA GGATCGGATG CCATTGGTCT | 650 |
CGCTCCGAGG GCGATGGAGA AGTGCAAGAG CAGAGCTTGA | 700 |
>AT1G04250.1 longest ORF length:229
MMGSVELNLR ETELCLGLPG GDTVAPVTGN KRGFSETVDL KLNLNNEPAN | 50 |
KEGSTTHDVV TFDSKEKSAC PKDPAKPPAK AQVVGWPPVR SYRKNVMVSC | 100 |
QKSSGGPEAA AFVKVSMDGA PYLRKIDLRM YKSYDELSNA LSNMFSSFTM | 150 |
GKHGGEEGMI DFMNERKLMD LVNSWDYVPS YEDKDGDWML VGDVPWPMFV | 200 |
DTCKRLRLMK GSDAIGLAPR AMEKCKSRA | 250 |
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