fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G04250 IAA17, AXR3 indole-3-acetic acid inducible 17, AUXIN RESISTANT 3, AUX/IAA transcriptional regulator family protein (.1)

>AT1G04250.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 446
StyI C|C[AT][AT]GG 191, 236, 446, 583


Click here to view TAIR data

>AT1G04250.1 length:690
ATGATGGGCA GTGTCGAGCT GAATCTGAGG GAGACTGAGC TGTGTCTTGG 
50
TCTTCCCGGT GGAGATACAG TGGCTCCGGT AACCGGAAAC AAGAGAGGGT 
100
TCTCAGAGAC GGTTGATCTG AAGCTAAATC TGAATAATGA GCCTGCAAAC 
150
AAGGAAGGAT CTACGACTCA TGACGTCGTG ACTTTTGATT CCAAGGAGAA 
200
GAGTGCTTGT CCTAAAGATC CAGCCAAACC TCCGGCCAAG GCACAAGTTG 
250
TGGGATGGCC ACCGGTGAGA TCATACCGGA AGAACGTGAT GGTTTCCTGC 
300
CAAAAATCAA GCGGTGGCCC GGAGGCGGCG GCGTTCGTGA AGGTATCAAT 
350
GGACGGAGCA CCGTACTTGA GGAAAATCGA TTTGAGGATG TATAAAAGCT 
400
ACGATGAGCT TTCTAATGCT TTGTCCAACA TGTTCAGCTC TTTTACCATG 
450
GGCAAACATG GAGGAGAAGA AGGAATGATA GACTTCATGA ATGAGAGGAA 
500
ATTGATGGAT TTGGTGAATA GCTGGGACTA TGTTCCCTCT TATGAAGACA 
550
AAGACGGTGA TTGGATGCTC GTCGGCGACG TTCCTTGGCC AATGTTCGTC 
600
GATACATGCA AGCGTTTACG TCTCATGAAA GGATCGGATG CCATTGGTCT 
650
CGCTCCGAGG GCGATGGAGA AGTGCAAGAG CAGAGCTTGA 
700

>AT1G04250.1 longest ORF length:229
MMGSVELNLR ETELCLGLPG GDTVAPVTGN KRGFSETVDL KLNLNNEPAN 
50
KEGSTTHDVV TFDSKEKSAC PKDPAKPPAK AQVVGWPPVR SYRKNVMVSC 
100
QKSSGGPEAA AFVKVSMDGA PYLRKIDLRM YKSYDELSNA LSNMFSSFTM 
150
GKHGGEEGMI DFMNERKLMD LVNSWDYVPS YEDKDGDWML VGDVPWPMFV 
200
DTCKRLRLMK GSDAIGLAPR AMEKCKSRA
250