fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G04445 C2H2-like zinc finger protein (.1)

>AT1G04445.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
KpnI GGTAC|C 403
PvuII CAG|CTG 61, 430


Click here to view TAIR data

>AT1G04445.1 length:519
ATGCCATTTT CAGAACCCCA AGAATGTGCG GTTTGTAAGA GAGTCTTCTT 
50
ATCATCACAC CAGCTGATCT CACACTACAA CGCCGCTCAC TCCAATCGCC 
100
AGTATTCCAC CTTCTCTTCC TCCCCCGCCG CCGCCGCCGC TGCTGCACCC 
150
ACCACCTTCC GCCACTACAC TAACGTAAAC GGCCGGAACC CTAATCCTGA 
200
TTTTCAGGCG AGGAATCAGT TTGACGTGAA TTATTACCGT AGAGGTTACT 
250
TAGATGATCA AGGGAGGTTC CATAAAGGAT CTCCTCATGC GCCGGCGATG 
300
AGTCCGACCA GAAAATATAA GTTTTTGCTG CCAAAGATGC CGCCGACGAC 
350
GATGCCGGAG ACTCCGAAAC TGATGGATCT TTTTCCGGAG ACGTCATCGG 
400
GAGGTACCCG TACGCTGCCG CTTCTTTGCC AGCTGGACCA ATGGAGACCG 
450
GAGGATAGCG CTGTGGCGGA GAACGGAGGA GCCAACTCCA GTCCCATCGA 
500
CTTGTCATTA AGGCTGTGA
550

>AT1G04445.1 longest ORF length:172
MPFSEPQECA VCKRVFLSSH QLISHYNAAH SNRQYSTFSS SPAAAAAAAP 
50
TTFRHYTNVN GRNPNPDFQA RNQFDVNYYR RGYLDDQGRF HKGSPHAPAM 
100
SPTRKYKFLL PKMPPTTMPE TPKLMDLFPE TSSGGTRTLP LLCQLDQWRP 
150
EDSAVAENGG ANSSPIDLSL RL
200