fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G04550 BDL, IAA12 indole-3-acetic acid inducible 12, BODENLOS, AUX/IAA transcriptional regulator family protein (.1.2)

>AT1G04550.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
SacI GAGCT|C 325, 428
StyI C|C[AT][AT]GG 177


Click here to view TAIR data

>AT1G04550.1 length:522
ATGCGTGGTG TGTCAGAATT GGAGGTGGGG AAGAGTAATC TTCCGGCGGA 
50
GAGTGAGCTG GAATTGGGAT TAGGGCTCAG CCTCGGTGGT GGCGCGTGGA 
100
AAGAGCGTGG GAGGATTCTT ACTGCTAAGG ATTTTCCTTC CGTTGGGTCT 
150
AAACGCTCTG CTGAATCTTC CTCTCACCAA GGAGCTTCTC CTCCTCGTTC 
200
AAGTCAAGTG GTAGGATGGC CACCAATTGG GTTACACAGG ATGAACAGTT 
250
TGGTTAATAA CCAAGCTATG AAGGCAGCAA GAGCGGAAGA AGGAGACGGG 
300
GAGAAGAAAG TTGTGAAGAA TGATGAGCTC AAAGATGTGT CAATGAAGGT 
350
GAATCCGAAA GTTCAGGGCT TAGGGTTTGT TAAGGTGAAT ATGGATGGAG 
400
TTGGTATAGG CAGAAAAGTG GATATGAGAG CTCATTCGTC TTACGAAAAC 
450
TTGGCTCAGA CGCTTGAGGA AATGTTCTTT GGAATGACAG GTCTGTACTG 
500
TTTTCAAATG CGTACACTAT AA
550

>AT1G04550.1 longest ORF length:173
MRGVSELEVG KSNLPAESEL ELGLGLSLGG GAWKERGRIL TAKDFPSVGS 
50
KRSAESSSHQ GASPPRSSQV VGWPPIGLHR MNSLVNNQAM KAARAEEGDG 
100
EKKVVKNDEL KDVSMKVNPK VQGLGFVKVN MDGVGIGRKV DMRAHSSYEN 
150
LAQTLEEMFF GMTGLYCFQM RTL
200