Locus |
Common name |
Short description |
AT1G04550 |
BDL, IAA12 |
indole-3-acetic acid inducible 12, BODENLOS, AUX/IAA transcriptional regulator family protein (.1.2) |
>AT1G04550.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
601 |
SacI
| GAGCT|C |
325, 428 |
StyI
| C|C[AT][AT]GG |
177, 601 |
Click here to view TAIR data
>AT1G04550.2 length:720
ATGCGTGGTG TGTCAGAATT GGAGGTGGGG AAGAGTAATC TTCCGGCGGA | 50 |
GAGTGAGCTG GAATTGGGAT TAGGGCTCAG CCTCGGTGGT GGCGCGTGGA | 100 |
AAGAGCGTGG GAGGATTCTT ACTGCTAAGG ATTTTCCTTC CGTTGGGTCT | 150 |
AAACGCTCTG CTGAATCTTC CTCTCACCAA GGAGCTTCTC CTCCTCGTTC | 200 |
AAGTCAAGTG GTAGGATGGC CACCAATTGG GTTACACAGG ATGAACAGTT | 250 |
TGGTTAATAA CCAAGCTATG AAGGCAGCAA GAGCGGAAGA AGGAGACGGG | 300 |
GAGAAGAAAG TTGTGAAGAA TGATGAGCTC AAAGATGTGT CAATGAAGGT | 350 |
GAATCCGAAA GTTCAGGGCT TAGGGTTTGT TAAGGTGAAT ATGGATGGAG | 400 |
TTGGTATAGG CAGAAAAGTG GATATGAGAG CTCATTCGTC TTACGAAAAC | 450 |
TTGGCTCAGA CGCTTGAGGA AATGTTCTTT GGAATGACAG GTACTACTTG | 500 |
TCGAGAAAAG GTTAAACCTT TAAGGCTTTT AGATGGATCA TCAGACTTTG | 550 |
TACTCACTTA TGAAGATAAG GAAGGGGATT GGATGCTTGT TGGAGATGTT | 600 |
CCATGGAGAA TGTTTATCAA CTCGGTGAAA AGGCTTCGGA TCATGGGAAC | 650 |
CTCAGAAGCT AGTGGACTAG CTCCAAGACG TCAAGAGCAG AAGGATAGAC | 700 |
AAAGAAACAA CCCTGTTTAG | 750 |
>AT1G04550.2 longest ORF length:239
MRGVSELEVG KSNLPAESEL ELGLGLSLGG GAWKERGRIL TAKDFPSVGS | 50 |
KRSAESSSHQ GASPPRSSQV VGWPPIGLHR MNSLVNNQAM KAARAEEGDG | 100 |
EKKVVKNDEL KDVSMKVNPK VQGLGFVKVN MDGVGIGRKV DMRAHSSYEN | 150 |
LAQTLEEMFF GMTGTTCREK VKPLRLLDGS SDFVLTYEDK EGDWMLVGDV | 200 |
PWRMFINSVK RLRIMGTSEA SGLAPRRQEQ KDRQRNNPV | 250 |
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