fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G05420 ATOFP12, OFP12 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 12, ovate family protein 12 (.1)

>AT1G05420.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 393, 540
PvuII CAG|CTG 675


Click here to view TAIR data

>AT1G05420.1 length:681
ATGCCAAGAG TCATGTGGAA AAACTTCCAT CTTTGCTTCC CATCAAATCT 
50
CACCAAGCCC TCTTCATCTC CGTCCGGTGC CACCTCCGAC GATCCCAACC 
100
GTCCATCCAT TCTTCTCATC AACAACTTTA ACCTCCTATA TGACGACTCC 
150
TCCGCCGCCC ACCGCCGCCT ATCCAAGCCT CTTATCCACG ACGTTGAACC 
200
CTCTTCCACC TTCACCGCCT CCACCTCCAC CGCAGCTAAC TCTTCTTCCT 
250
CCTCTGCCTC TTATGATGAT TCCGATAATT ACGGTTTTGC CCCTGACGAC 
300
GACTCTCCCC CTCCTGACTT AACCGCCGTT TTAGCCTCCC GCCGCTTCTT 
350
CTTCTCTTCT CCTGGCTGCT CAAACTCAAT CACTGACTCG CCAGATCTCC 
400
GCTGCCGGGA TAATTACGAT ACTGCCACTA GGCTTCTTAC CGGAGGAACC 
450
GCCGTGAAAC ACTACGTGCA ATCTCCTGAT CCGTACAACG ACTTCCGACG 
500
ATCAATGCAG GAGATGATCG ACGCCGTTAC AAACGCCGGA GATCTTCGCC 
550
GTTACGAGTT CTTGCATGAG CTGTTACTCA GTTACCTCTC TTTAAATGCC 
600
GCCGATACAC ACAAGTTCAT TATCAGAGCT TTCGCCGACA TTCTCGTCTC 
650
TCTCCTATCG GACGGTCACC GGATCAGCTG A
700

>AT1G05420.1 longest ORF length:226
MPRVMWKNFH LCFPSNLTKP SSSPSGATSD DPNRPSILLI NNFNLLYDDS 
50
SAAHRRLSKP LIHDVEPSST FTASTSTAAN SSSSSASYDD SDNYGFAPDD 
100
DSPPPDLTAV LASRRFFFSS PGCSNSITDS PDLRCRDNYD TATRLLTGGT 
150
AVKHYVQSPD PYNDFRRSMQ EMIDAVTNAG DLRRYEFLHE LLLSYLSLNA 
200
ADTHKFIIRA FADILVSLLS DGHRIS
250