fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G05710 bHLH153 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>AT1G05710.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 4
KpnI GGTAC|C 270
StyI C|C[AT][AT]GG 107
XbaI T|CTAGA 10, 198


Click here to view TAIR data

>AT1G05710.1 length:450
ATGGAATTCT CTAGAGACGC TGGAATGATG ATGGAGAATA AGCGGAATGT 
50
CTGCTCTCTC GGAGAAAGCA GTATCAAACG CCACAAGTCT GATCTCTCTT 
100
TCAGTTCCAA GGAGAGGAAG GACAAGGTTG GAGAACGTAT TTCAGCTCTT 
150
CAACAAATAG TTTCCCCTTA TGGAAAGACC GACACTGCAT CAGTTCTTCT 
200
AGACGCGATG CATTACATAG AGTTTCTTCA CGAACAAGTG AAGGTGCTAA 
250
GTGCTCCGTA TCTGCAAACG GTACCTGATG CTACGCAGGA GGAGCTGGAG 
300
CAGTACAGCC TGAGAAACAG AGGATTATGT CTTGTTCCAA TGGAGAATAC 
350
AGTTGGAGTT GCTCAAAGCA ACGGCGCTGA TATATGGGCG CCCGTGAAGA 
400
CTCCTCTATC ACCAGCTTTC AGTGTCACAT CTCAATCACC CTTTAGATGA 
450

>AT1G05710.1 longest ORF length:149
MEFSRDAGMM MENKRNVCSL GESSIKRHKS DLSFSSKERK DKVGERISAL 
50
QQIVSPYGKT DTASVLLDAM HYIEFLHEQV KVLSAPYLQT VPDATQEELE 
100
QYSLRNRGLC LVPMENTVGV AQSNGADIWA PVKTPLSPAF SVTSQSPFR
150