Locus |
Common name |
Short description |
AT1G05710 |
bHLH153 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
>AT1G05710.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
4 |
KpnI
| GGTAC|C |
336 |
PstI
| CTGCA|G |
246 |
StyI
| C|C[AT][AT]GG |
107 |
XbaI
| T|CTAGA |
10, 198 |
Click here to view TAIR data
>AT1G05710.2 length:516
ATGGAATTCT CTAGAGACGC TGGAATGATG ATGGAGAATA AGCGGAATGT | 50 |
CTGCTCTCTC GGAGAAAGCA GTATCAAACG CCACAAGTCT GATCTCTCTT | 100 |
TCAGTTCCAA GGAGAGGAAG GACAAGGTTG GAGAACGTAT TTCAGCTCTT | 150 |
CAACAAATAG TTTCCCCTTA TGGAAAGACC GACACTGCAT CAGTTCTTCT | 200 |
AGACGCGATG CATTACATAG AGTTTCTTCA CGAACAAGTG AAGGTCTGCA | 250 |
GTTCAATACC AAGCATGATT CATTCATCTT TATCTGAGTT CCCATGTTCT | 300 |
TTTGTACAGG TGCTAAGTGC TCCGTATCTG CAAACGGTAC CTGATGCTAC | 350 |
GCAGGAGGAG CTGGAGCAGT ACAGCCTGAG AAACAGAGGA TTATGTCTTG | 400 |
TTCCAATGGA GAATACAGTT GGAGTTGCTC AAAGCAACGG CGCTGATATA | 450 |
TGGGCGCCCG TGAAGACTCC TCTATCACCA GCTTTCAGTG TCACATCTCA | 500 |
ATCACCCTTT AGATGA | 550 |
>AT1G05710.2 longest ORF length:171
MEFSRDAGMM MENKRNVCSL GESSIKRHKS DLSFSSKERK DKVGERISAL | 50 |
QQIVSPYGKT DTASVLLDAM HYIEFLHEQV KVCSSIPSMI HSSLSEFPCS | 100 |
FVQVLSAPYL QTVPDATQEE LEQYSLRNRG LCLVPMENTV GVAQSNGADI | 150 |
WAPVKTPLSP AFSVTSQSPF R | 200 |
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