fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G06150 bHLH089, EMB1444 EMBRYO DEFECTIVE 1444, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT1G06150.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
BamHI G|GATCC 480
HindIII A|AGCTT 153
NheI G|CTAGC 1245
PstI CTGCA|G 1265, 1801
StyI C|C[AT][AT]GG 1083, 1684, 1878, 2186
XbaI T|CTAGA 1335
XhoI C|TCGAG 915, 2023


Click here to view TAIR data

>AT1G06150.1 length:2205
ATGGGTTATA CCTTGCAACA GATACTGAGG AGCATCTGCT CCAACACGGA 
50
TTGGAACTAC GCCGTGTTCT GGAAACTTAA TCACCACTCG CCAATGGTTC 
100
TTACTTTGGA GGATGTGTAC TGTGTTAATC ATGAGCGCGG TTTGATGCCG 
150
GAAAGCTTGC ATGGAGGGCG CCATGCTCAT GACCCTCTTG GGTTAGCTGT 
200
GGCTAAGATG TCATATCATG TACACTCTCT TGGGGAAGGG ATTGTAGGAC 
250
AAGTAGCAAT CTCTGGACAA CATCAATGGA TCTTCTCTGA ATATTTGAAT 
300
GACTCTCATT CGACACTTCA GGTTCACAAC GGTTGGGAGA GTCAAATTTC 
350
TGCTGGAATT AAGACAATTC TTATAGTAGC TGTTGGTTCT TGCGGAGTTG 
400
TGCAGCTTGG CTCTTTGTGT AAAGTTGAAG AAGACCCGGC TTTGGTGACT 
450
CATATCAGGC ATTTATTTTT GGCACTTACG GATCCACTAG CAGACCATGC 
500
ATCAAATTTA ATGCAATGTG ATATTAACAG TCCATCGGAT CGGCCAAAAA 
550
TACCTTCCAA ATGCTTACAT GAGGCATCCC CTGATTTCTC AGGAGAATTT 
600
GACAAAGCTA TGGATATGGA AGGGTTAAAT ATTGTATCTC AAAACACAAG 
650
TAATAGAAGT AACGACCTTC CATACAATTT CACTCCAACA TATTTTCACA 
700
TGGAGAGGAC TGCTCAAGTA ATTGGTGGGC TTGAAGCAGT CCAACCTTCC 
750
ATGTTTGGAA GCAATGATTG TGTTACAAGT GGTTTTTCAG TTGGTGTGGT 
800
TGATACTAAA CACAAGAATC AAGTGGATAT AAGTGATATG AGTAAGGTGA 
850
TTTATGATGA GGAAACAGGT GGATACCGAT ACTCAAGAGA ATTAGATCCC 
900
AATTTCCAAC ACTACTCGAG GAATCATGTG CGTAATAGTG GAGGCACATC 
950
TGCTTTAGCT ATGGAGAGTG ATAGGCTAAA AGCAGGTTCA TCATATCCAC 
1000
AACTTGATTC AACTGTACTT ACTGCGTTGA AAACAGATAA AGATTATTCT 
1050
CGTCGAAATG AGGTTTTCCA ACCATCTGAG AGCCAAGGAA GTATATTTGT 
1100
GAAAGATACA GAACATAGGC AGGAGGAAAA AAGTGAGTCA AGTCAGTTGG 
1150
ATGCTTTAAC TGCATCTTTG TGTTCTTTTT CTGGCAGTGA GCTGTTAGAG 
1200
GCATTAGGGC CAGCGTTCAG TAAAACAAGC ACTGATTATG GGGAGCTAGC 
1250
AAAGTTTGAA TCTGCTGCAG CTATAAGACG AACAAATGAT ATGAGCCATA 
1300
GTCACCTGAC ATTTGAATCC AGCTCCGAGA ATCTTCTAGA TGCCGTTGTT 
1350
GCTAGTATGA GTAATGGTGA TGGTAATGTC AGGCGTGAAA TATCTTCAAG 
1400
CAGGTCAACA CAGTCATTGC TTACAACTGC TGAAATGGCA CAGGCAGAAC 
1450
CTTTTGGTCA TAATAAGCAA AATATTGTTA GCACAGTTGA TAGTGTGATT 
1500
AGCCAGCCGC CTCTAGCAGA TGGGCTTATC CAACAGAATC CATCAAATAT 
1550
CTGCGGAGCA TTTTCTTCCA TTGGGTTTTC ATCAACATGT CTCAGTTCAT 
1600
CCAGCGACCA GTTTCCGACG TCCCTGGAAA TTCCCAAGAA GAACAAAAAG 
1650
AGAGCTAAAC CTGGTGAAAG TTCTCGGCCT CGTCCAAGGG ACAGGCAACT 
1700
TATTCAGGAT CGTATCAAAG AACTAAGGGA GCTTGTGCCT AATGGATCTA 
1750
AGTGCAGTAT TGATTCCTTG CTAGAGTGCA CGATCAAGCA CATGCTCTTC 
1800
CTGCAGAGTG TCTCTCAGCA TGCTGACAAG CTCACTAAAA GTGCAAGTTC 
1850
AAAGATGCAA CACAAGGATA CCGGCACCCT AGGAATATCA AGCACTGAAC 
1900
AAGGTTCGAG CTGGGCAGTG GAGATTGGAG GCCATCTGCA AGTGTGCTCA 
1950
ATCATGGTGG AGAATCTGGA CAAAGAAGGA GTGATGCTTA TTGAGATGCT 
2000
ATGCGAAGAA TGTAGCCACT TTCTCGAGAT AGCGAACGTG ATAAGGAGCT 
2050
TGGAACTCAT CATCCTCAGA GGCACCACTG AGAAACAAGG CGAGAAAACA 
2100
TGGATATGTT TTGTAGTGGA GGGACAAAAC AACAAAGTAA TGCACAGGAT 
2150
GGACATCCTG TGGTCTCTTG TGCAAATATT TCAACCCAAG GCTACAAACA 
2200
GGTAG
2250

>AT1G06150.1 longest ORF length:734
MGYTLQQILR SICSNTDWNY AVFWKLNHHS PMVLTLEDVY CVNHERGLMP 
50
ESLHGGRHAH DPLGLAVAKM SYHVHSLGEG IVGQVAISGQ HQWIFSEYLN 
100
DSHSTLQVHN GWESQISAGI KTILIVAVGS CGVVQLGSLC KVEEDPALVT 
150
HIRHLFLALT DPLADHASNL MQCDINSPSD RPKIPSKCLH EASPDFSGEF 
200
DKAMDMEGLN IVSQNTSNRS NDLPYNFTPT YFHMERTAQV IGGLEAVQPS 
250
MFGSNDCVTS GFSVGVVDTK HKNQVDISDM SKVIYDEETG GYRYSRELDP 
300
NFQHYSRNHV RNSGGTSALA MESDRLKAGS SYPQLDSTVL TALKTDKDYS 
350
RRNEVFQPSE SQGSIFVKDT EHRQEEKSES SQLDALTASL CSFSGSELLE 
400
ALGPAFSKTS TDYGELAKFE SAAAIRRTND MSHSHLTFES SSENLLDAVV 
450
ASMSNGDGNV RREISSSRST QSLLTTAEMA QAEPFGHNKQ NIVSTVDSVI 
500
SQPPLADGLI QQNPSNICGA FSSIGFSSTC LSSSSDQFPT SLEIPKKNKK 
550
RAKPGESSRP RPRDRQLIQD RIKELRELVP NGSKCSIDSL LECTIKHMLF 
600
LQSVSQHADK LTKSASSKMQ HKDTGTLGIS STEQGSSWAV EIGGHLQVCS 
650
IMVENLDKEG VMLIEMLCEE CSHFLEIANV IRSLELIILR GTTEKQGEKT 
700
WICFVVEGQN NKVMHRMDIL WSLVQIFQPK ATNR
750