fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G06150 bHLH089, EMB1444 EMBRYO DEFECTIVE 1444, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2)

>AT1G06150.2 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, EcoRV, NcoI, NotI, PacI, PvuII, SacI, SalI, SmaI
Name Recognition sequence Cut positions
BamHI G|GATCC 1165, 1330, 1762, 1892, 5989
BglII A|GATCT 3343, 5039
EcoRI G|AATTC 4443, 9483, 9924
HindIII A|AGCTT 2550, 2679, 3374, 4888, 7692, 8980
HpaI GTT|AAC 2069
KpnI GGTAC|C 8889
NdeI CA|TATG 4804, 9784
NheI G|CTAGC 6845
PstI CTGCA|G 5740, 6138, 6865, 7509
SpeI A|CTAGT 9249
StyI C|C[AT][AT]GG 602, 3865, 3871, 6683, 7284, 7586, 7739, 8472
XbaI T|CTAGA 6935
XhoI C|TCGAG 4141, 6515, 8022


Click here to view TAIR data

>AT1G06150 genomic sequence (4525-4619,4831-4974,5288-5369,5452-5493,5746-5805,5933-6052,6144-7352,7461-7562,7716-7856,7995-8120,8408-8491,) length:10231
tgacgttact gtgatttgcg aacctgtaat cacgtgactg tcaacatgtg 
50
ttttgtgatt tccatttttt ttgagtgatt tgatttcctt tttttttttt 
100
gcgtcctcag aatttccttt ttgttttctt ttaaaaataa atttcctttt 
150
tcaaagttaa atttcctttt tgtcggtgat aacgttcctt atagatacta 
200
tactaatctc tgattctctt cttacggatc aaagttctca acctccgaag 
250
agcaaaaccc taaagtgcta tttcttcttc ttctttaaaa aacttgagtt 
300
ccttcttgag caagttatgt cgaagagccg ttatgaatct cattctcgct 
350
tcttcgtcga aggttattta ggatgatgcc atacaacggc tattttggat 
400
gatgctgaat gatcgttacg aatctcatga acaagtgagt gtcaattcgt 
450
tgttcgccca aattagtttg tctgggttca ttcgatgacg atccatgtgg 
500
aatcttttct ccggcgtcgt ggcggttagt ttgtggtgtc acacggttgc 
550
agtctctctc tcatcgccAT GTCAACGACG CCACCGCCAA GTCATCCAAA 
600
CCCTAGGGTC CTACAAGGCC CAACAAAAAA CAGAGGAAAT TTTCAACCCA 
650
TCAAGCCCAT GAAGATTATT GGCCAGgtaa ttcttggaga ttatttgtga 
700
tgatgtcaca caacggctat tttggatgat gtcatacact gcctgttttg 
750
gaatttggtt cagCATAGAG AACAAAGGAC TACAGTGAAG ATTTGTGAGA 
800
TGACTGAGAG AAGACGACTT GGAGAGGTAT CAGATAAGGA AAAGAGTCTC 
850
GCATTACATC GATTTCAGTA CGATTTCAGG TGAatttcct ttccctttaa 
900
aaatccaaat tgcgtttcta aatttttact tttttttttt ttggttttgt 
950
tttagactag atttacaaaa cgatatgaaa actaaccgga ctttagatcc 
1000
cgtcacttga cttagtcatt gaacgttagc gatttcacaa ctttaatttg 
1050
ttttctagtc gttatgtaaa tttagcattt tagttttttt taggttttta 
1100
ggtttttttt tttttttttt tttagactac atttacaaaa cgatatgaaa 
1150
attaaccgga ttttggatcc cgtcacttga cttagtcatt gatcattagc 
1200
gatttcacaa gttcaatttg ttttctagtc gttatgtaaa tttagcattt 
1250
tagttttttt aggtttttag tttttttttt tttgttttag actacattta 
1300
caaaatgata tgaaaactaa ccagactttg gatcccgtca cttgacttag 
1350
tcattgatca ttagcgattt cacaagttca atttgttttc tagtcgttat 
1400
gtaaatttag cattttagtt tttttaggtt tttagttttt ttttttgttt 
1450
tagcctacat ttacaaaatg atatgaaaac taaccggact ttgggtcccg 
1500
tcatttgatc gttagcgatt tcacaagttc aatttgtttt ctaattgtta 
1550
ggttttcttt ttgtttgttt tatactagat ttacaaaacg atatgaaaac 
1600
taacgagact ttagatcccg tcatttgaca tagtcatttg atcgttagca 
1650
attttataag tttaatttgt tttctatcgt tatgtaaatt tatcatttta 
1700
gtttagtata gttttgtttt aaactagatt tacaaaacaa tgtgaaaact 
1750
aaccggactt tggatcccgt catttgacct aatcatttga tcgcacaagt 
1800
tcaatttatt ttctaattgt tatgtaaaca ttttaatttt gttttgtttt 
1850
atattagatt tgcaaaacga tatgcaaact aaccggactt tggatccctt 
1900
catttgacct agttatttaa ttgttagaga ttctataagt tcaatttgtt 
1950
ttctaatcat tatgtaaatt tagcattttt tttttttttg gtttgtttcg 
2000
ttttgtttta gactaaaatt acaaaaaaat atgaaaacta accggacttt 
2050
gaatcacgtc atttgattgt taacgatttc ttaagttcaa tttattttct 
2100
catgtaaata tagcatttaa gttactttta ggaaaaattt atcaaacgat 
2150
ataaaaatta acgggatcta attttggatt tcgtcattta acctattcca 
2200
tttgatcgtt agatatttca cgagttaaat ttgttttctc aatagcttta 
2250
atactcattt ttttttaacg attttttaaa ttacactttc aaattatttt 
2300
tttatgctct acggatttca tatacgtttt tttttttttc tttttgatga 
2350
taatgaaatt aaacttataa tcacgtgtta aaaaaaacag agttacctcg 
2400
cgaaattttt tgatataaga acagagtagt agctagaaaa accaaacctt 
2450
gtgtgtgttc attggcgacc tattcaatgc tttcatgaga taaccaacta 
2500
tggaccagga acaaaaatac ttatacatat tttcataaac caaacataaa 
2550
agcttcatct caaagacgaa acaacttaaa gaacacacac cggtttgtaa 
2600
gaagcaataa cttgtccgat tgccagtcat aacaagactc cagagccata 
2650
tcctattgcc gctgctttcc agttcaacaa gctttcttta tttgtcggtt 
2700
ttggttgttg tgtctgtggt gttcactctt taaacttttt catgtttttc 
2750
ttcaaactct gaatgcacat atccatttaa caaacgacga taaatattca 
2800
ctcttcaaag tttttcttgt tttattctca cttcaattat gagataatat 
2850
tgttgaccaa aagaagttgt tatgatctat ttttcttctt tcctacaggg 
2900
agaccgttaa atgtattctt gaacttgggc ttcgtccaca aaaacatgcc 
2950
aaaagagaaa tgatattgtt gaatagtaaa agtcatacaa ctttcggttt 
3000
cctttttctc cttccctctt atcctcttga cagtatatct acgcaaaaaa 
3050
ttgtgtgtta ttatacatat agaaagaaca aaagaaagaa cgaaaaggaa 
3100
aatggaatgt gctcaagtcc caaaggtcaa acaaagaagt gtgaaattga 
3150
aagcgaaagg tgaggcttct ttcttgatac acttgttttg tttgtttggc 
3200
caatgttcat cattcgcccc ttatcacaat cacacctccc tcttcccaaa 
3250
caaagccttc tttcacctac ttctctcttt ttgtttctaa caaatattga 
3300
tttttttttc ttgtaacaaa tacttatgaa cttgaagaaa aaagatctac 
3350
ttattttagg gttatatttt cagaagcttg accatacaca tgtttgaaac 
3400
ttgataagta aaagaggaga aaatcaaaag gaatttgttt ggagatagta 
3450
tgatttatct ttcaactgga aataatcatt agattccata gattttgtat 
3500
ggaccacaat cccatcacac attccaaatc cttctttgcc cacaaaaaaa 
3550
aaaaaaatgg ctggagaaca aacgatacac ataacagatc atatcaaaaa 
3600
taaggatcac atcaacatat agacgcatta ttattatgtt ctatcaaaca 
3650
ccatttcaaa gaaaaaagtt atttgtatgg cgaaagaatt acaagtacta 
3700
cacatcgtgt aatttgtatg atgaagaaaa gtaaaataaa gtgcactagg 
3750
aacaaaattt cacttggtga atcattttgc tggccattag agagatcata 
3800
tcactcgaat gttttttcca cattattaat cccatgcctt aaaatccacc 
3850
ccccacacta ctaccctagg cctagggttg ctaaaatgcg cacctagcca 
3900
gcgcacgata gctctgataa tattaccacc gttgctaaaa tgagccctga 
3950
attttcttca acgcccccct ttaaaaagga gatgtctttt tagcaactct 
4000
gcgtttcttt ctctctctct agtcacttgt tgttcttact caaagtgttc 
4050
atctctcttt caccggtgga tttctcgaca aagattctaa ctttgagaga 
4100
gatttttcgg ttgtagatgc agattcagag cgtatcatct ctcgagaaag 
4150
gatcaatgtc tcatgaaata agctagactc tgtttctgtt ttcttcttct 
4200
tcgatctcaa tttcttcttc ttcgagctag gggttgttta tgtttgggaa 
4250
aggaATGGGC ACTAGGCAGT ATTCACTGGG AGAAGTAGGG CCACCAATAA 
4300
ATCCGAGAGC TGGATTGCGA AGGGAACAAG CTGGTAGAGG TTCATACAGA 
4350
GGTAGTTAGt agattcgtag ctcatctgta ggcaaaaagg gtttcctttt 
4400
aggtggcaag actgtttatt ttcagacaca gagactgatt aagaattcaa 
4450
gggagagttc ttgtcggggg actattttaa gttttaaaaa ggggtgtttt 
4500
ttagtggtga aggggaaggt ttagATGGGT TATACCTTGC AACAGATACT 
4550
GAGGAGCATC TGCTCCAACA CGGATTGGAA CTACGCCGTG TTCTGGAAAC 
4600
TTAATCACCA CTCGCCAATg taagttatcc aaaagtttat aatcttatgc 
4650
caatatgttg gttctgtttg gtggaattta gtaaggactc tgataagatc 
4700
gattttgttg ctttgagagt tatagtcaat acgtagtcaa ttttgttgaa 
4750
tgtcaagtgt ggtttttaag tattaagcct agaagtcaag tagaagtttt 
4800
tcacatatgg gctattaaaa acacttgcag GGTTCTTACT TTGGAGGATG 
4850
TGTACTGTGT TAATCATGAG CGCGGTTTGA TGCCGGAAAG CTTGCATGGA 
4900
GGGCGCCATG CTCATGACCC TCTTGGGTTA GCTGTGGCTA AGATGTCATA 
4950
TCATGTACAC TCTCTTGGGG AAGGgtaagg aaaatttgct tgctgatgca 
5000
ctgttcttgt taatactctt gctatcttca ttactttgag atcttttatt 
5050
gatgttgtca aacaatgcaa agacttggtg tgtttatagc ttgactgtgt 
5100
attacagtct tacattaatg tagctataat attctctgct cttttaactt 
5150
ttgtttcatt ggtattgact acatgatata cttaatattg aatcttctat 
5200
caggaacatc agctattaat tcgttttgat gattgaattt tacttaatga 
5250
tgctaacatc ttcattcgta tctctctact attatagGAT TGTAGGACAA 
5300
GTAGCAATCT CTGGACAACA TCAATGGATC TTCTCTGAAT ATTTGAATGA 
5350
CTCTCATTCG ACACTTCAGg ttgggaaata tgcacgttgt tgaatttgaa 
5400
aatataattt cgtgggaaca ttttgtctga aatataatat tttcccctta 
5450
gGTTCACAAC GGTTGGGAGA GTCAAATTTC TGCTGGAATT AAGgtatctg 
5500
ataagttttc agtttttttt cttttctttg cctgccctgg ttttcatgtc 
5550
ttttgtgtat tgttatctat cgcatgggat attcttgtgg ttgaatgttt 
5600
cttcatattt ataattagat tagatatttt ctacttccac acatttgtct 
5650
ctttttctag tccttgtaac aaaacattga agtttttttt ccctcaacgt 
5700
ttgcatttca gtttttatga caatttgttt cttcattctc tgcagACAAT 
5750
TCTTATAGTA GCTGTTGGTT CTTGCGGAGT TGTGCAGCTT GGCTCTTTGT 
5800
GTAAAgtaag taagatgttc taactgtatg cggtgttcaa agtagcttat 
5850
acaatatagt aagagagctt tcccattgaa aatgtaaaca tttgaatgcc 
5900
tctgatcttc ctgtatactt ttggtggaac agGTTGAAGA AGACCCGGCT 
5950
TTGGTGACTC ATATCAGGCA TTTATTTTTG GCACTTACGG ATCCACTAGC 
6000
AGACCATGCA TCAAATTTAA TGCAATGTGA TATTAACAGT CCATCGGATC 
6050
GGgtaatgat ctttctcatt caatgttcgt gcaaaattgg aagagatgtg 
6100
atttctgagt ataaccatga ttcgttgtat aattttcctg cagCCAAAAA 
6150
TACCTTCCAA ATGCTTACAT GAGGCATCCC CTGATTTCTC AGGAGAATTT 
6200
GACAAAGCTA TGGATATGGA AGGGTTAAAT ATTGTATCTC AAAACACAAG 
6250
TAATAGAAGT AACGACCTTC CATACAATTT CACTCCAACA TATTTTCACA 
6300
TGGAGAGGAC TGCTCAAGTA ATTGGTGGGC TTGAAGCAGT CCAACCTTCC 
6350
ATGTTTGGAA GCAATGATTG TGTTACAAGT GGTTTTTCAG TTGGTGTGGT 
6400
TGATACTAAA CACAAGAATC AAGTGGATAT AAGTGATATG AGTAAGGTGA 
6450
TTTATGATGA GGAAACAGGT GGATACCGAT ACTCAAGAGA ATTAGATCCC 
6500
AATTTCCAAC ACTACTCGAG GAATCATGTG CGTAATAGTG GAGGCACATC 
6550
TGCTTTAGCT ATGGAGAGTG ATAGGCTAAA AGCAGGTTCA TCATATCCAC 
6600
AACTTGATTC AACTGTACTT ACTGCGTTGA AAACAGATAA AGATTATTCT 
6650
CGTCGAAATG AGGTTTTCCA ACCATCTGAG AGCCAAGGAA GTATATTTGT 
6700
GAAAGATACA GAACATAGGC AGGAGGAAAA AAGTGAGTCA AGTCAGTTGG 
6750
ATGCTTTAAC TGCATCTTTG TGTTCTTTTT CTGGCAGTGA GCTGTTAGAG 
6800
GCATTAGGGC CAGCGTTCAG TAAAACAAGC ACTGATTATG GGGAGCTAGC 
6850
AAAGTTTGAA TCTGCTGCAG CTATAAGACG AACAAATGAT ATGAGCCATA 
6900
GTCACCTGAC ATTTGAATCC AGCTCCGAGA ATCTTCTAGA TGCCGTTGTT 
6950
GCTAGTATGA GTAATGGTGA TGGTAATGTC AGGCGTGAAA TATCTTCAAG 
7000
CAGGTCAACA CAGTCATTGC TTACAACTGC TGAAATGGCA CAGGCAGAAC 
7050
CTTTTGGTCA TAATAAGCAA AATATTGTTA GCACAGTTGA TAGTGTGATT 
7100
AGCCAGCCGC CTCTAGCAGA TGGGCTTATC CAACAGAATC CATCAAATAT 
7150
CTGCGGAGCA TTTTCTTCCA TTGGGTTTTC ATCAACATGT CTCAGTTCAT 
7200
CCAGCGACCA GTTTCCGACG TCCCTGGAAA TTCCCAAGAA GAACAAAAAG 
7250
AGAGCTAAAC CTGGTGAAAG TTCTCGGCCT CGTCCAAGGG ACAGGCAACT 
7300
TATTCAGGAT CGTATCAAAG AACTAAGGGA GCTTGTGCCT AATGGATCTA 
7350
AGgtggtttt tctattcaga gcatgtgact gactgcactc atgcagttgt 
7400
agtgtcatga attgtatatt ttcttctgct attttctaac tatgttgtta 
7450
tattgtacag TGCAGTATTG ATTCCTTGCT AGAGTGCACG ATCAAGCACA 
7500
TGCTCTTCCT GCAGAGTGTC TCTCAGCATG CTGACAAGCT CACTAAAAGT 
7550
GCAAGTTCAA AGgtacttaa taatttctag tcttcccaag gaaagttgct 
7600
ttatattctc catagtttgt gaagagacgt ttccgtttat tcatgactga 
7650
ttaatagatc atttatcaaa ttgttgggga agttttctta aaagcttata 
7700
catttgaagt tacagATGCA ACACAAGGAT ACCGGCACCC TAGGAATATC 
7750
AAGCACTGAA CAAGGTTCGA GCTGGGCAGT GGAGATTGGA GGCCATCTGC 
7800
AAGTGTGCTC AATCATGGTG GAGAATCTGG ACAAAGAAGG AGTGATGCTT 
7850
ATTGAGgtgt gcattatttt ctcgttacct ttttcatgta tttgaagcac 
7900
tttgtcagaa cgactggcga actctgcatt tatcatcctg aattttgcgg 
7950
ttatatgcaa ttccttgctt gagtgtgttt tggatgttga acagATGCTA 
8000
TGCGAAGAAT GTAGCCACTT TCTCGAGATA GCGAACGTGA TAAGGAGCTT 
8050
GGAACTCATC ATCCTCAGAG GCACCACTGA GAAACAAGGC GAGAAAACAT 
8100
GGATATGTTT TGTAGTGGAG gtacgttatt tgggaataat tgagaactgt 
8150
tctccactct aaggtcacac acagcatgga atagactcca acacttggct 
8200
aaacaacttt acagtttaca tgatctgaat agtcatccat tttttaacat 
8250
ggaactaaac aacgttattt tagttttaaa tccgaatgga aaacaaacaa 
8300
tataatcgct ttaacattac agcatcatga aatttccaca aggtccttaa 
8350
tcattgtatt gttgttatat cacatctaat aactggatac tctttatgaa 
8400
ttgacagGGA CAAAACAACA AAGTAATGCA CAGGATGGAC ATCCTGTGGT 
8450
CTCTTGTGCA AATATTTCAA CCCAAGGCTA CAAACAGGTA Gcaacaacga 
8500
aacccgtcac atcatgcaga ctcggcttca tgtatcaaca actacaagga 
8550
ttgaaaagca tgatgagaac agagaagaaa acgctgtgta tgtttatagt 
8600
gtttgtgtgt gtgtgatact attatcttgg aataggtata aaaagtctaa 
8650
aggtgtgcca tttttgtttg gaattgttat catgaacact tctcagattg 
8700
attaatgcca caatatagca acattcagta ttattgtctg gtgaacctga 
8750
aaccctctag tcctttcaga gtttctctat acctaaaaga ttcttttgga 
8800
caaaacaatt tttttttcaa agtctgcatc tttatcgaca atctcaaatt 
8850
ctttacATGA ATGCTTTCGC CAATGTGCAT AGTCTTCGGG TACCTTCTCA 
8900
CCATCTTCGA GATTTCTCAG CGTCACTCTC TCTGGCTCCT CCAAATTTAA 
8950
AGAAAATCAT CAAGCAATGC TCGACGCCCA AGCTTCTGGA GTCTGCTTTA 
9000
GCCGCCATGA TCAAGACGAG CCTAAACCAA GACTGTCGCT TAATGAACCA 
9050
ATTCATCACT GCCTGCACTT CCTTTAAACG TCTTGACCTC GCAGTTTCCA 
9100
CCATGACCCA GATGCAGGAA CCTAATGTTT TCGTCTACAA CGCGTTGTTT 
9150
AAAGGCTTCG TTACTTGTTC TCACCCGATT CGATCTCTGG AATTGTATGT 
9200
TCGTATGCTC AGGGACTCGG TTTCTCCATC AAGCTACACG TACTCTTCAC 
9250
TAGTAAAGGC GTCTTCTTTC GCTTCTAGGT TTGGGGAATC ACTCCAGGCG 
9300
CACATCTGGA AATTTGGATT TGGTTTCCAT GTTAAAATTC AGACGACTCT 
9350
TATTGATTTT TATTCAGCCA CTGGTAGAAT CAGGGAAGCC AGGAAAGTGT 
9400
TTGATGAAAT GCCTGAAAGA GATGATATTG CTTGGACCAC AATGGTTTCT 
9450
GCTTATCGTC GGGTTTTGGA TATGGACTCT GCGAATTCTT TAGCTAACCA 
9500
AATGTCGGAG AAGAATGAGG CTACGTCGAA CTGTTTGATT AATGGATATA 
9550
TGGGATTAGG CAATCTGGAA CAAGCAGAGT CATTGTTTAA TCAGATGCCT 
9600
GTGAAGGACA TAATCTCATG GACCACTATG ATCAAGGGTT ACTCGCAGAA 
9650
TAAAAGATAT AGAGAAGCAA TTGCAGTGTT CTACAAAATG ATGGAGGAGG 
9700
GCATCATTCC TGATGAGGTT ACTATGTCAA CTGTTATTTC AGCTTGTGCC 
9750
CATCTCGGCG TGCTGGAAAT AGGTAAGGAG GTTCATATGT ACACGTTACA 
9800
GAACGGTTTT GTTCTTGATG TCTACATTGG TTCTGCACTG GTAGATATGT 
9850
ATTCCAAATG TGGTAGCTTA GAGCGGGCGC TTCTGGTGTT CTTCAATTTG 
9900
CCCAAAAAGA ATCTATTTTG TTGGAATTCG ATCATTGAAG GACTGGCGGC 
9950
TCATGGTTTT GCACAAGAAG CACTGAAAAT GTTTGCCAAG ATGGAGATGG 
10000
AGTCGGTGAA ACCTAACGCA GTCACTTTTG TGAGTGTTTT TACTGCGTGT 
10050
ACTCACGCAG GTCTTGTTGA CGAAGGTCGG AGGATATATC GCAGCATGAT 
10100
TGATGACTAT TCCATTGTCT CTAATGTTGA ACATTACGGA GGCATGGTTC 
10150
ATCTATTCAG CAAAGCTGGG TTGATCTATG AGGCTCTTGA ATTGATTGGA 
10200
AATATGGAAT TTGAACCAAA TGCGGTTATC T
10250