fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 (.1)

>AT1G06160.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
SacI GAGCT|C 66


Click here to view TAIR data

>AT1G06160.1 length:735
ATGGAATATC AAACTAACTT CTTAAGTGGA GAGTTTTCCC CGGAGAACTC 
50
TTCTTCAAGC TCATGGAGCT CACAAGAATC ATTCTTGTGG GAAGAGAGTT 
100
TCTTACATCA ATCATTTGAC CAATCCTTCC TTTTATCTAG CCCTACTGAT 
150
AACTACTGTG ATGACTTCTT TGCATTTGAA TCATCAATCA TAAAAGAAGA 
200
AGGAAAAGAA GCCACCGTGG CGGCCGAGGA GGAGGAGAAG TCATACAGAG 
250
GAGTGAGGAA ACGGCCGTGG GGGAAATTCG CGGCCGAGAT AAGAGACTCA 
300
ACGAGGAAAG GGATAAGAGT GTGGCTTGGG ACATTCGACA CCGCGGAGGC 
350
GGCGGCTCTC GCTTATGATC AGGCGGCTTT CGCTTTGAAA GGCAGCCTCG 
400
CAGTACTCAA TTTCCCCGCG GATGTCGTTG AAGAATCTCT CCGGAAGATG 
450
GAGAATGTGA ATCTCAATGA TGGAGAGTCT CCGGTGATAG CCTTGAAGAG 
500
AAAACACTCC ATGAGAAACC GTCCTAGAGG AAAGAAGAAA TCTTCTTCTT 
550
CTTCGACGTT GACATCTTCT CCTTCTTCCT CCTCCTCCTA TTCATCTTCT 
600
TCGTCTTCTT CTTCTTTGTC GTCAAGAAGT AGAAAACAGA GTGTTGTTAT 
650
GACGCAAGAA AGTAATACAA CACTTGTGGT TCTTGAGGAT TTAGGTGCTG 
700
AATACTTAGA AGAGCTTATG AGATCATGTT CTTGA
750

>AT1G06160.1 longest ORF length:244
MEYQTNFLSG EFSPENSSSS SWSSQESFLW EESFLHQSFD QSFLLSSPTD 
50
NYCDDFFAFE SSIIKEEGKE ATVAAEEEEK SYRGVRKRPW GKFAAEIRDS 
100
TRKGIRVWLG TFDTAEAAAL AYDQAAFALK GSLAVLNFPA DVVEESLRKM 
150
ENVNLNDGES PVIALKRKHS MRNRPRGKKK SSSSSTLTSS PSSSSSYSSS 
200
SSSSSLSSRS RKQSVVMTQE SNTTLVVLED LGAEYLEELM RSCS
250