|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT1G06170 | bHLH149 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2) |
>AT1G06170.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 150 |
| PstI | CTGCA|G | 138, 505 |
| StyI | C|C[AT][AT]GG | 561 |
| XbaI | T|CTAGA | 144 |
Click here to view TAIR data
>AT1G06170.1 length:1263
ATGGGAGGAG GAGGCATGTT TGAAGAAATT GGGTGTTTTG ATCCAAATGC | 50 |
TCCGGCAGAA ATGACTGCTG AGAGCAGTTT CTCTCCGTCC GAGCCACCAC | 100 |
CGACGATCAC GGTCATCGGT AGCAACAGTA ACAGCAACTG CAGTCTAGAA | 150 |
GATCTCTCTG CATTCCACCT CAGCCCACAA GACTCTTCTC TACCTGCCTC | 200 |
AGCCTCAGCT TATGCTCATC AGCTTCACAT TAATGCTACT CCTAATTGTG | 250 |
ATCATCAATT CCAGAGTTCA ATGCACCAAA CCCTCCAAGA TCCATCGTAT | 300 |
GCGCAACAGT CGAATCATTG GGACAATGGT TACCAAGATT TTGTGAATTT | 350 |
GGGTCCTAAT CATACCACTC CTGACCTACT CAGTCTCTTG CAATTGCCAA | 400 |
GATCCTCACT TCCACCTTTC GCAAACCCTA GCATTCAAGA CATTATCATG | 450 |
ACAACATCTT CCTCTGTCGC CGCCTATGAC CCGCTCTTCC ATCTGAATTT | 500 |
TCCTCTGCAG CCTCCTAATG GGAGTTTCAT GGGAGTGGAT CAAGATCAAA | 550 |
CTGAGACTAA CCAAGGAGTG AACTTGATGT ATGATGAAGA AAACAACAAC | 600 |
CTCGACGATG GTCTTAACCG TAAAGGCAGA GGATCGAAAA AGCGTAAAAT | 650 |
TTTCCCTACA GAACGCGAGA GAAGAGTTCA CTTCAAAGAC CGGTTTGGTG | 700 |
ACTTAAAGAA TCTAATTCCA AATCCCACCA AGAATGATAG AGCATCAATC | 750 |
GTCGGAGAAG CGATAGATTA CATCAAAGAG TTGCTAAGGA CGATCGATGA | 800 |
GTTCAAGCTG CTAGTGGAAA AGAAGAGAGT GAAACAGAGG AACAGAGAAG | 850 |
GAGATGATGT TGTTGATGAG AACTTCAAGG CTCAAAGCGA AGTAGTAGAA | 900 |
CAATGTTTGA TCAATAAGAA GAACAATGCC TTGAGATGCT CATGGCTCAA | 950 |
GAGGAAATCG AAATTCACTG ATGTCGATGT ACGTATCATA GACGATGAAG | 1000 |
TTACCATCAA GATCGTGCAG AAGAAGAAAA TCAATTGTTT GTTGTTCGTA | 1050 |
TCCAAAGTCG TTGACCAACT TGAGCTTGAT CTTCACCATG TAGCTGGTGC | 1100 |
ACAAATCGGA GAGCACCACA GTTTCTTGTT CAACGCCAAG ATTAGTGAAG | 1150 |
GATCTAGTGT TTATGCAAGT GCCATAGCAG ATAGAGTAAT GGAAGTGTTG | 1200 |
AAGAAACAAT ACATGGAAGC TCTTTCGGCG AATAATGGTT ATCACTGTTA | 1250 |
CTCTAGTGAT TAA | 1300 |
>AT1G06170.1 longest ORF length:420
MGGGGMFEEI GCFDPNAPAE MTAESSFSPS EPPPTITVIG SNSNSNCSLE | 50 |
DLSAFHLSPQ DSSLPASASA YAHQLHINAT PNCDHQFQSS MHQTLQDPSY | 100 |
AQQSNHWDNG YQDFVNLGPN HTTPDLLSLL QLPRSSLPPF ANPSIQDIIM | 150 |
TTSSSVAAYD PLFHLNFPLQ PPNGSFMGVD QDQTETNQGV NLMYDEENNN | 200 |
LDDGLNRKGR GSKKRKIFPT ERERRVHFKD RFGDLKNLIP NPTKNDRASI | 250 |
VGEAIDYIKE LLRTIDEFKL LVEKKRVKQR NREGDDVVDE NFKAQSEVVE | 300 |
QCLINKKNNA LRCSWLKRKS KFTDVDVRII DDEVTIKIVQ KKKINCLLFV | 350 |
SKVVDQLELD LHHVAGAQIG EHHSFLFNAK ISEGSSVYAS AIADRVMEVL | 400 |
KKQYMEALSA NNGYHCYSSD | 450 |