fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G06280 LBD2 LOB domain-containing protein 2 (.1)

>AT1G06280.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 435
HindIII A|AGCTT 68, 342
HpaI GTT|AAC 463
SacI GAGCT|C 325
StyI C|C[AT][AT]GG 288


Click here to view TAIR data

>AT1G06280.1 length:621
ATGATGCAAA GGAACTCTAA CAACACCAGC ATCACCAGTA ACATCTCCAA 
50
TAACTCATCG TCGCATCAAG CTTGTGCTTC ATGCAAACAT CAAAGGAAGA 
100
AATGCAACAA CGAATGTATC TTATCGCCGT ATTTCCCAGC CCGCAAGACT 
150
AAAGAGTTTC AGGCCGTGCA CAAGGTCTTC GGTGTCAGTA ACGTACAAAA 
200
AATGGTACGG ACGGTACGTG AAGAGGACCG TACCAAGCTC TCTGATTCTT 
250
TAACATGGGA AGCTCTATGG AGACAGAAAG ATCCGGTCCT TGGCTCCTAT 
300
GGAGAGTATA GGAGGATTTG TGAAGAGCTC AAGTTATACA AAAGCTTGGT 
350
TCATAACCAG CCTCTCATTG GTTGGGATAA TAATCAACGC GTATTTAACA 
400
ATAATAGTAA CAACAAGAAC GGATTAGCGA TGACGAATTC GAGTGGATCA 
450
GGAGGGTTTA GTGTTAACAA CAATGGTGTT GGTGTGAATC GGGAGATTGT 
500
CAACGGTGGA TATGCATCAA GGAATGTGCA AGGTGGTTGG GAAAATCTAA 
550
AGCACGATCA AAGGCAACAA TGTTATGCAG TGATTAATAA TGGTTTCAAA 
600
CAACACTATC TCCCACTCTA A
650

>AT1G06280.1 longest ORF length:206
MMQRNSNNTS ITSNISNNSS SHQACASCKH QRKKCNNECI LSPYFPARKT 
50
KEFQAVHKVF GVSNVQKMVR TVREEDRTKL SDSLTWEALW RQKDPVLGSY 
100
GEYRRICEEL KLYKSLVHNQ PLIGWDNNQR VFNNNSNNKN GLAMTNSSGS 
150
GGFSVNNNGV GVNREIVNGG YASRNVQGGW ENLKHDQRQQ CYAVINNGFK 
200
QHYLPL
250