fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G06850 ATBZIP52 basic leucine-zipper 52 (.1.2)

>AT1G06850.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 147
EcoRV GAT|ATC 382
PstI CTGCA|G 482


Click here to view TAIR data

>AT1G06850.2 length:753
ATGGAGAAAT CAGATCCTCC ACCAGTCCCA AAGCCCGGCG CCACTATTAT 
50
CCCCTCCTCC GATCCAATTC CTAATGCCGA TCCGATTCCA TCTTCTTCCT 
100
TCCACCGCCG ATCTCGCTCC GACGATATGT CCATGTTCAT GTTCATGGAT 
150
CCCCTCTCCT CCGCCGCACC ACCTTCCTCC GACGACCTTC CCTCCGACGA 
200
CGATCTCTTC TCTTCTTTCA TCGATGTCGA TAGCCTCACC TCTAATCCCA 
250
ATCCCTTTCA AAATCCTTCC CTCTCCTCCA ACTCCGTTTC CGGCGCTGCT 
300
AATCCTCCTC CTCCTCCTTC CTCTCGTCCT CGCCACCGTC ACAGCAATTC 
350
CGTTGACGCT GGATGCGCCA TGTATGCCGG TGATATCATG GACGCTAAGA 
400
AAGCTATGCC TCCTGAAAAA CTCTCTGAGC TTTGGAACAT CGATCCCAAA 
450
CGCGCCAAAA GGATTCTAGC GAATCGACAA TCTGCAGCTC GATCCAAAGA 
500
GAGAAAAGCT CGATACATTC AAGAACTTGA GCGCAAAGTT CAATCTCTTC 
550
AAACCGAAGC TACCACTCTC TCTGCTCAGC TTACTCTCTA CCAGAGAGAC 
600
ACAAATGGAC TAGCAAACGA AAACACAGAG CTGAAACTTA GGTTGCAAGC 
650
AATGGAACAA CAAGCTCAGC TTCGTAATGC TTTAAACGAA GCGTTGAGGA 
700
AAGAAGTTGA AAGGATGAAG ATGGAGACAG GAGAAATCTC TGATGCATTC 
750
TAG
800

>AT1G06850.2 longest ORF length:250
MEKSDPPPVP KPGATIIPSS DPIPNADPIP SSSFHRRSRS DDMSMFMFMD 
50
PLSSAAPPSS DDLPSDDDLF SSFIDVDSLT SNPNPFQNPS LSSNSVSGAA 
100
NPPPPPSSRP RHRHSNSVDA GCAMYAGDIM DAKKAMPPEK LSELWNIDPK 
150
RAKRILANRQ SAARSKERKA RYIQELERKV QSLQTEATTL SAQLTLYQRD 
200
TNGLANENTE LKLRLQAMEQ QAQLRNALNE ALRKEVERMK METGEISDAF 
250