fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G06910 TRFL7 TRF-like 7 (.1)

>AT1G06910.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
HindIII A|AGCTT 389, 728
PstI CTGCA|G 671, 1019
StyI C|C[AT][AT]GG 823, 1009
XhoI C|TCGAG 82


Click here to view TAIR data

>AT1G06910.1 length:1173
ATGGCACTCT CGCAGTGGAA GGAAGCTATA CTCGAAGGGA TTTTCATGGA 
50
GATTGAGGAT GGTATTGTGG AAGAGAAGAA TCTCGAGCGA TTAGAGAATC 
100
TTGTGGAGAT TTTACACAAA GAAGGTTCTA AAGTACCCAA ATCAGTCACG 
150
GAAGCGTATT GTAAAGTAGC TGTGGAGTGC ACAGTGAAGT GTCTCGCTTA 
200
TGAGAAAGAT GCAAAAAAGG CTTACACCGA AGCAATCAAA ACGATATGGC 
250
TCGGTAGGAT TATGCCTTTA TGCGATAAGG TTAGTTGTTT GGTTACTCTT 
300
GACCTCTTGA AATGCTGTCG AAGATTATGG AAGGCCCACA CTGACGACAA 
350
GGCTTGTAAG ACACTGATGG ATGAAGATAC AAGAGACAAA GCTTTGGTTT 
400
GTTTGAGGAA GGTTGTTTTA GATTTGAATC CCAATCTTGT TTTAGAGAAT 
450
CTCAACATGG ATGAATCGGA TGAGATTGAA TCTAGTGAAG AATCTGAAGA 
500
GACAGAATCA ATGGTTGAAG CAAGAGAGGG CGTGGGTAAT CAGAACAGTC 
550
AGGCGTCTGA AGCTATGGAA GAAGACGACC AAGAGAGCCT CTTAGATACT 
600
GAACTGGAAA GACCTACTTC TGGAGGGTCA AAAGCTGTAT ATGTACCCAG 
650
TCAATTCAAT CCCATTCCAT CTGCAGTTGT TGACAGAGCG CTCAGAAAGC 
700
TGAGAGCTAG TAAAATCGAG CTAATGAAAG CTTTAGAAAA AGGAAGACCT 
750
TCAAATTTAA ACAATGAGAC GATTACAGAA CAAGAAAACG ATGTTGCTAA 
800
TCCTTCTGCA ACAAACGCTG CACCAAGGCC TAGCTTGATG GAGCCACGTA 
850
GCACAGCACA CACTTATGAA TGGAATGACT CCATTGATGA TTCAGATGGA 
900
GAAATGGGCG ATGACATTGA AAGGATTAAT AAATCAAAAC GTAAAAGAAT 
950
TGTCGTGTCT CCTTTGAAAA GAAACCGATG TTCAGAAGGT GCTAGAAGGC 
1000
CAAAACTTCC TTGGAGTACT GCAGAAACGC TGGCCGTACT CAAAGGCTAT 
1050
GAAAAGTATG GTGCAAACTG GAAACGGATC AAAGATGAGA ATCCAGTTCT 
1100
AGTGCGCAGA ACTAATGGTG ATATTAAAGA TAAATTTCGA GTTGAGATGA 
1150
GACGTGAAGA GCGCCGTCAT TGA
1200

>AT1G06910.1 longest ORF length:390
MALSQWKEAI LEGIFMEIED GIVEEKNLER LENLVEILHK EGSKVPKSVT 
50
EAYCKVAVEC TVKCLAYEKD AKKAYTEAIK TIWLGRIMPL CDKVSCLVTL 
100
DLLKCCRRLW KAHTDDKACK TLMDEDTRDK ALVCLRKVVL DLNPNLVLEN 
150
LNMDESDEIE SSEESEETES MVEAREGVGN QNSQASEAME EDDQESLLDT 
200
ELERPTSGGS KAVYVPSQFN PIPSAVVDRA LRKLRASKIE LMKALEKGRP 
250
SNLNNETITE QENDVANPSA TNAAPRPSLM EPRSTAHTYE WNDSIDDSDG 
300
EMGDDIERIN KSKRKRIVVS PLKRNRCSEG ARRPKLPWST AETLAVLKGY 
350
EKYGANWKRI KDENPVLVRR TNGDIKDKFR VEMRREERRH 
400