fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G06920 ATOFP4, OFP4 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 4, ovate family protein 4 (.1)

>AT1G06920.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 218
BglII A|GATCT 661
EcoRI G|AATTC 671
PstI CTGCA|G 314
StyI C|C[AT][AT]GG 500, 640, 866


Click here to view TAIR data

>AT1G06920.1 length:948
ATGAGGAACT ATAAGTTAAG ATTGTCAGTT ATGAGCCCAA GTGAATGGTT 
50
CCACAAGCTC AAGAACATGA CAAAACCTAG AAAAAAGCAT TCTCTTCCTC 
100
TTTACTCCAT AAACACTACC AAGAAGAGAA AACCTTCCTC TGAGTCAAAG 
150
TCTCTTCCTT ACTCTTCAAC TTCTTACTTC TTCAATAGGT CACGCTCACG 
200
CACATCCTTT GAATCTAGGA TCCTTCAAAT TTCACCAAGA AACTCTCTTC 
250
ACAACATACA GAGCAAAAGA AAGACTGTTT ACAAGCCTTC TCCTCCTTCC 
300
TCTTCTATTG TATCTGCAGG TTTTAACAAA ACATTTCATC AAAGCCATGA 
350
TTCTCTCTCT GCCTCTTCCA ACTTGAAAGT CATTTCTTCT GAAGATGATA 
400
TTATCATCGA CATGAATAAT AGAGATTTCA AGAAGAAAAC TTTCAAAGAG 
450
ATCACGAAGT TTGATTCAAC GGAGAAAGCC TGTCGTGCAA GTAACCGAAC 
500
CAAGGAAACA CATATACCTC ATCATCTCTC TGTGAAGGTC AGTAAAGAGA 
550
AAGAAGATGA AGAGGAAGAT GCATGTCGAA CCAAGAAGAA ACATCAGAAA 
600
ACATTAGTTT CTAGTGGAAG AAGATCATCA GCTAAATCTC CAAGGATAAA 
650
GCTCAGAGCG AGATCTCCTA GAATTCAAGT CTCGCCTCGT AGAAGCAAAT 
700
CAAGATCACA GAACAAACAA ATTCTTGACA GTTTTGCAGT AATCAAGAGT 
750
TCTATCGATC CGAGCAAGGA TTTCAGAGAA TCAATGGTGG AGATGATAGC 
800
AGAGAACAAC ATCAGAACCT CTAACGACAT GGAGGATCTT CTAGTATGTT 
850
ACCTTACCTT GAATCCCAAG GAGTATCATG ATCTCATTAT CAAGGTTTTC 
900
GTTCAAGTCT GGCTTGAAGT CATAAACTCT ACATTTGCAT CGAAGTAG
950

>AT1G06920.1 longest ORF length:315
MRNYKLRLSV MSPSEWFHKL KNMTKPRKKH SLPLYSINTT KKRKPSSESK 
50
SLPYSSTSYF FNRSRSRTSF ESRILQISPR NSLHNIQSKR KTVYKPSPPS 
100
SSIVSAGFNK TFHQSHDSLS ASSNLKVISS EDDIIIDMNN RDFKKKTFKE 
150
ITKFDSTEKA CRASNRTKET HIPHHLSVKV SKEKEDEEED ACRTKKKHQK 
200
TLVSSGRRSS AKSPRIKLRA RSPRIQVSPR RSKSRSQNKQ ILDSFAVIKS 
250
SIDPSKDFRE SMVEMIAENN IRTSNDMEDL LVCYLTLNPK EYHDLIIKVF 
300
VQVWLEVINS TFASK
350