fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G07360 MAC5A MOS4-associated complex subunit 5A, CCCH-type zinc fingerfamily protein with RNA-binding domain (.1)

>AT1G07360.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 1393
EcoRI G|AATTC 713
HindIII A|AGCTT 439
NdeI CA|TATG 1187
SacI GAGCT|C 844
XhoI C|TCGAG 708, 718, 962


Click here to view TAIR data

>AT1G07360.1 length:1446
ATGGCTCACA GAATACTGAG AGATCATGAA GCCGATGGAT GGGAACGCTC 
50
CGATTTCCCA ATCATCTGCG AATCTTGTCT CGGTGACAAC CCCTACGTGC 
100
GAATGACCAA AGCGAATTAT GATAAGGAAT GCAAGATATG TACACGACCT 
150
TTCACGGTGT TTAGGTGGCG ACCTGGCCGG GATGCTAGAT ACAAGAAAAC 
200
CGAAATTTGT CAGACTTGCT GCAAGTTGAA AAATGTTTGT CAAGTCTGTC 
250
TTCTGGATCT TGAGTATGGT CTTCCAGTTC AAGTAAGAGA CACAGCACTC 
300
AACATTAGTA CTCATGACTC TATCCCTAAA AGTGATGTCA ACAGAGAGTA 
350
TTTTGCTGAA GAGCATGACA GGAAGGCTAG AGCTGGACTG GATTATGAAT 
400
CTTCATTCGG GAAGATGCGA CCCAATGATA CTATTTTAAA GCTTCAAAGA 
450
ACAACACCGT ACTATAAGAG GAACCGAGCA CATGTTTGTA GTTTCTTCAT 
500
CAGGGGTGAG TGTACAAGAG GTGCTGAATG TCCATACCGG CATGAGATGC 
550
CCGAAACAGG AGAGCTATCC CAGCAAAACA TAAAAGACCG TTATTATGGT 
600
GTTAATGATC CAGTTGCTAT GAAGTTGCTT GGCAAAGCTG GTGAGATGGG 
650
CACTTTGGAA TCGCCAGACG ATGAAAGCAT CAAAACCCTT TACGTCGGTG 
700
GACTTAACTC GAGAATTCTC GAGCAGGACA TACGAGACCA ATTCTACGCT 
750
CATGGAGAAA TTGAATCTAT CAGAATCTTG GCCGATAAAG CCTGTGCATT 
800
TGTCACATAC ACAAGCCGTG AAGGTGCAGA GAAGGCTGCG CAAGAGCTCT 
850
CCAACAGGCT AGTCATCAAC GGTCAGAGGC TAAAACTCAC ATGGGGAAGA 
900
CCCAAACCTG ATCAAGATGG TGCAAACCAA CAGGGCGGTG TGGCTCATAG 
950
TGGGTTACTA CCTCGAGCCG TTATATCTCA GCAGCACAAT CAACCCCCAC 
1000
CAATGCAGCA GTACTATATG CACCCACCAC CAGCTAACCA AGACAAACCT 
1050
TATTACCCAT CAATGGACCC ACAGAGAATG GGTGCAGTCA TTTCAACCCA 
1100
AGAGGCTGGT GGTTCAAGCA CTGAGAACAA CGGAGCTTCA TCTTCTTCTT 
1150
ACATGATGCC TCCACACCAG TCATACCCAC CACCACCATA TGGATATATG 
1200
CCATCGCCTT ACCAGCAGCA GTATCCTCCT AACCATCATC ATCAACCTAG 
1250
TCCTATGCAG CACTATGCCC CGCCTCCAGC AGCTTACCCG TACCCACAGC 
1300
AACCTGGTCC TGGATCAAGA CCTGCACCGT CTCCAACCGC GGTCTCTGCT 
1350
ATATCACCCG ACTCTGCACC TGCTGGGTCT GGAGCACCTT CGGGATCCTC 
1400
TCAACAAGCT CCTGATGTTT CTACAGCTAC TGGTTCGTCT CAGTAG
1450

>AT1G07360.1 longest ORF length:481
MAHRILRDHE ADGWERSDFP IICESCLGDN PYVRMTKANY DKECKICTRP 
50
FTVFRWRPGR DARYKKTEIC QTCCKLKNVC QVCLLDLEYG LPVQVRDTAL 
100
NISTHDSIPK SDVNREYFAE EHDRKARAGL DYESSFGKMR PNDTILKLQR 
150
TTPYYKRNRA HVCSFFIRGE CTRGAECPYR HEMPETGELS QQNIKDRYYG 
200
VNDPVAMKLL GKAGEMGTLE SPDDESIKTL YVGGLNSRIL EQDIRDQFYA 
250
HGEIESIRIL ADKACAFVTY TSREGAEKAA QELSNRLVIN GQRLKLTWGR 
300
PKPDQDGANQ QGGVAHSGLL PRAVISQQHN QPPPMQQYYM HPPPANQDKP 
350
YYPSMDPQRM GAVISTQEAG GSSTENNGAS SSSYMMPPHQ SYPPPPYGYM 
400
PSPYQQQYPP NHHHQPSPMQ HYAPPPAAYP YPQQPGPGSR PAPSPTAVSA 
450
ISPDSAPAGS GAPSGSSQQA PDVSTATGSS Q
500