Locus |
Common name |
Short description |
AT1G07530 |
SCL14, ATGRAS2 |
GRAS \(GAI, RGA, SCR\) 2, ARABIDOPSIS THALIANA GRAS \(GAI, RGA, SCR\) 2, SCARECROW-like 14 (.1) |
>AT1G07530.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AclI, AfeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, AscI, AseI, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvI, BcgI, BciVI, BglI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspMI, BspT107I(HgiCI), BsrGI, BssHII, BssSI, BstAPI, BstEII, BstXI, BstZ17I, BtrI, ClaI, DraIII, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NciI, NdeI, NgoMIV, NotI, NruI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PvuI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SfaNI, SfiI, SfoI, SmaI, SnaBI, SphI, SspI, StuI, SwaI, TliI, Tth111I, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
585 |
AccII(FnuDII)
| CG|CG |
920, 1622, 1918 |
AccIII(BspMII)
| T|CCGGA |
12 |
AciI
| C|CGC |
1074, 1089, 1230, 1359, 2153 |
AflII
| C|TTAAG |
1902 |
AflIII
| A|CPuPyGT |
1394, 1418 |
AgeI
| A|CCGGT |
610, 1342, 1603 |
AluI
| AG|CT |
97, 196, 337, 727, 756, 872, 967, 990, 1204, 1333, 1441, 1590, 1611, 1755, 1857, 1992, 1996, 2148 |
AlwNI
| CAGNNN|CTG |
2179 |
ApaLI
| G|TGCAC |
1199 |
ApoI
| Pu|AATTPy |
792 |
AvaI
| C|PyCGPuG |
1839 |
AvaII
| G|G[AT]CC |
595, 1339 |
BamHI
| G|GATCC |
28, 141 |
BbvCI
| CC|TCAGC |
1619 |
BclI
| T|GATCA |
2226 |
BfaI
| C|TAG |
426, 477, 591, 729, 1137, 1274, 1811, 1994, 1998 |
BglII
| A|GATCT |
210, 1013, 1352 |
BlpI
| GC|TNAGC |
1332, 1567 |
BsaBI
| GATNN|NNATC |
2225 |
BsaJI
| C|CNNGG |
24, 32, 137, 803, 1029 |
BsaWI
| [AT]|CCGG[AT] |
12, 610, 1342, 1603 |
BsiHKAI
| G[AT]GC[AT]|C |
1199 |
BslI
| CCNNNNN|NNGG |
1623, 1641 |
BsoBI
| C|PyCGPuG |
1839 |
Bsp1286I
| G[GAT]GC[CAT]|C |
1199 |
BspEI
| T|CCGGA |
12 |
BspHI
| T|CATGA |
318 |
BsrBI
| GAG|CGG |
1291 |
BsrDI
| GCAATGNN| |
1282 |
BsrFI
| Pu|CCGGPy |
610, 1342, 1603 |
BsrI
| ACTGGN| |
512, 901, 2240 |
BssKI
| |CCNGG |
24, 1029, 1575 |
BstBI
| TT|CGAA |
672, 1371, 1595 |
BstF5I
| GGATGNN| |
16, 1219 |
BstNI
| CC|[AT]GG |
24, 1029, 1575 |
BstUI
| CG|CG |
920, 1622, 1918 |
BstYI
| Pu|GATCPy |
28, 141, 210, 1013, 1352 |
Bsu36I
| CC|TNAGG |
90 |
BtgI
| C|CPuPyGG |
32 |
BtsI
| GCAGTGNN| |
2114 |
Cac8I
| GCN|NGC |
478, 989, 1327, 1542, 1995, 2118 |
Cfr10I
| [AG]|CCGG[TC] |
610, 1342, 1603 |
DdeI
| C|TNAG |
89, 122, 343, 415, 745, 754, 817, 1156, 1245, 1331, 1566, 1588, 1618, 1720 |
DpnI
| GA-CH3|TC |
27, 140, 209, 407, 1012, 1220, 1351, 1498, 1735, 1897, 2128, 2225 |
DpnII
| |GATC |
27, 140, 209, 407, 1012, 1220, 1351, 1498, 1735, 1897, 2128, 2225 |
DraI
| TTT|AAA |
682 |
DrdI
| GACNNNN|NNGTC |
1095, 1419 |
EcoRI
| G|AATTC |
792 |
Fnu4HI
| GC|NGC |
339, 1386, 1443 |
HaeIII
| GG|CC |
1025, 1539 |
HhaI
| GCG|C |
919, 1621, 1919 |
HinP1I
| G|CGC |
919, 1621, 1919 |
HindIII
| A|AGCTT |
1591, 1756 |
HinfI
| G|ANTC |
19, 249, 504, 1071, 1112, 1152, 1181, 1550, 1986, 2177, 2266 |
HpaII
| C|CGG |
11, 609, 1341, 1602, 2136 |
Hpy188I
| TCN|GA |
228, 246, 501, 816, 996, 1287, 1516, 1547, 1721, 1942, 2131, 2180 |
Hpy99I
| CG[AT]CG| |
923 |
HpyCH4III
| ACN|GT |
442, 601, 643, 1094, 1528, 1678, 1821, 2233 |
HpyCH4IV
| A|CGT |
1379 |
HpyCH4V
| TG|CA |
702, 1043, 1198, 1309, 1384, 1483, 1846, 2172 |
MboI
| |GATC |
27, 140, 209, 407, 1012, 1220, 1351, 1498, 1735, 1897, 2128, 2225 |
MfeI
| C|AATTG |
1715 |
MseI
| T|TAA |
681, 828, 896, 1050, 1751, 1901 |
MslI
| CAPyNN|NNPuTG |
515, 787, 875, 2286 |
MspA1I
| C[AC]G|C[GT]G |
968, 1637 |
MspI
| C|CGG |
11, 609, 1341, 1602, 2136 |
MwoI
| GCNNNNN|NNGC |
336, 919, 1268, 1332, 1619 |
NcoI
| C|CATGG |
32 |
NheI
| G|CTAGC |
478, 1995 |
NlaIII
| CATG| |
31, 317, 1393, 1417, 1468 |
NlaIV
| GGN|NCC |
28, 141, 799, 1339, 1805, 2292 |
NsiI
| ATGCA|T |
1044 |
NspI
| PuCATG|Py |
1394, 1418 |
PciI
| A|CATGT |
1394, 1418 |
PspGI
| |CC[AT]GG |
24, 1029, 1575 |
PstI
| CTGCA|G |
1385 |
PvuII
| CAG|CTG |
968 |
RsaI
| GT|AC |
1344, 1705, 2203 |
Sau3AI
| |GATC |
27, 140, 209, 407, 1012, 1220, 1351, 1498, 1735, 1897, 2128, 2225 |
Sau96I
| G|GNCC |
595, 1026, 1339 |
ScrFI
| CC|NGG |
24, 1029, 1575 |
SexAI
| A|CC[AT]GGT |
1576 |
SfcI
| C|TPuPyAG |
200, 1067, 1385 |
SgrAI
| CPu|CCGGPyG |
611 |
SmlI
| C|TPyPuAG |
1902, 2158 |
SpeI
| A|CTAGT |
1138 |
StyI
| C|C[AT][AT]GG |
32, 137, 803 |
Taqƒ¿I
| T|CGA |
671, 1370, 1594, 1672, 1743, 1759, 1988, 2193, 2217 |
TfiI
| G|A[AT]TC |
19, 249, 504, 1071, 1112, 1152, 1550, 2177, 2266 |
TseI
| G|C[AT]GC |
339, 1386, 1443 |
Tsp45I
| |GT[CG]AC |
606, 1086, 1932, 1984 |
Tsp509I
| |AATT |
569, 693, 791, 1597, 1714, 1910 |
TspRI
| NNCA[CG]TGNN| |
512, 604, 1215, 1483, 1538, 2114 |
XbaI
| T|CTAGA |
1812 |
XcmI
| CCANNNNN|NNNNTGG |
41 |
XmnI
| GAANN|NNTTC |
1646, 1885 |
Click here to view TAIR data
>AT1G07530.1 length:2310
ATGGGTTCTT ATCCGGATGG ATTCCCTGGA TCCATGGACG AGTTGGATTT | 50 |
CAATAAGGAC TTTGATTTGC CTCCCTCCTC AAACCAAACC TTAGGTTTAG | 100 |
CTAATGGGTT CTATTTAGAT GACTTAGATT TCTCATCCTT GGATCCTCCA | 150 |
GAGGCATATC CCTCCCAGAA CAACAACAAC AACAACATCA ACAACAAAGC | 200 |
TGTAGCAGGA GATCTGTTAT CATCTTCATC TGATGACGCT GATTTCTCTG | 250 |
ATTCTGTTTT GAAGTATATA AGCCAAGTTC TTATGGAAGA GGATATGGAA | 300 |
GAGAAGCCTT GTATGTTTCA TGACGCTTTG GCTCTTCAAG CTGCTGAGAA | 350 |
ATCTCTCTAT GAGGCTCTTG GTGAGAAATA CCCTTCTTCG TCTTCTGCTT | 400 |
CTTCTGTGGA TCATCCTGAG AGATTGGCTA GTGATAGCCC TGACGGTTCT | 450 |
TGTTCAGGTG GTGCTTTTAG TGATTACGCT AGCACCACTA CCACTACTTC | 500 |
CTCTGATTCT CACTGGAGTG TTGATGGTTT GGAGAATAGA CCTTCTTGGT | 550 |
TACATACACC TATGCCGAGT AATTTTGTTT TCCAGTCTAC TTCTAGGTCC | 600 |
AACAGTGTCA CCGGTGGTGG TGGTGGTGGT AATAGTGCGG TTTACGGTTC | 650 |
AGGTTTTGGC GATGATTTGG TTTCGAATAT GTTTAAAGAT GATGAATTGG | 700 |
CTATGCAGTT CAAGAAAGGG GTTGAGGAAG CTAGTAAGTT CCTTCCTAAG | 750 |
TCTTCTCAGC TCTTTATTGA TGTGGATAGT TACATCCCTA TGAATTCTGG | 800 |
TTCCAAGGAA AATGGTTCTG AGGTTTTTGT TAAGACGGAG AAGAAAGATG | 850 |
AGACAGAGCA TCATCATCAT CATAGCTATG CTCCTCCTCC CAACAGATTA | 900 |
ACTGGTAAGA AAAGCCATTG GCGCGACGAA GATGAAGATT TCGTTGAAGA | 950 |
AAGAAGTAAC AAGCAATCAG CTGTTTATGT TGAGGAAAGC GAGCTTTCTG | 1000 |
AAATGTTTGA TAAGATCTTG GTATGTGGCC CTGGGAAACC TGTATGCATT | 1050 |
CTTAACCAGA ACTTTCCTAC AGAATCCGCT AAAGTCGTGA CCGCACAGTC | 1100 |
AAATGGAGCA AAGATTCGTG GGAAGAAATC AACTTCTACT AGTCATAGTA | 1150 |
ACGATTCTAA GAAAGAAACT GCTGATTTGA GGACTCTTTT GGTGTTATGT | 1200 |
GCACAAGCTG TATCAGTGGA TGATCGTAGA ACCGCCAACG AAATGCTAAG | 1250 |
GCAGATACGA GAGCATTCTT CGCCTCTAGG CAATGGTTCA GAGCGGTTGG | 1300 |
CTCATTATTT TGCAAATAGT CTTGAAGCAC GCTTAGCTGG GACCGGTACA | 1350 |
CAGATCTACA CCGCTTTATC TTCGAAGAAA ACGTCTGCAG CAGACATGTT | 1400 |
GAAGGCTTAC CAGACATACA TGTCGGTCTG CCCTTTCAAG AAAGCTGCTA | 1450 |
TCATATTTGC TAACCACAGC ATGATGCGTT TCACTGCAAA CGCCAACACG | 1500 |
ATCCACATAA TAGATTTCGG AATATCTTAC GGTTTTCAGT GGCCTGCTCT | 1550 |
GATTCATCGC CTCTCGCTCA GCAGACCTGG TGGTTCGCCT AAGCTTCGAA | 1600 |
TTACCGGTAT AGAGCTTCCT CAGCGCGGTT TTAGACCAGC GGAAGGAGTT | 1650 |
CAGGAGACAG GTCATCGCTT GGCTCGATAC TGTCAGCGAC ACAATGTTCC | 1700 |
GTTTGAGTAC AACGCAATTG CTCAGAAATG GGAAACGATC CAAGTCGAAG | 1750 |
ACTTAAAGCT TCGACAAGGA GAGTATGTGG TTGTGAACTC TTTGTTCCGT | 1800 |
TTCAGGAACC TTCTAGATGA GACCGTTCTG GTAAACAGCC CGAGAGATGC | 1850 |
AGTTTTGAAG CTGATAAGAA AAATAAACCC GAATGTCTTC ATTCCAGCGA | 1900 |
TCTTAAGCGG GAATTACAAC GCGCCATTCT TTGTCACGAG GTTCAGAGAA | 1950 |
GCGTTGTTTC ATTACTCGGC TGTGTTTGAT ATGTGTGACT CGAAGCTAGC | 2000 |
TAGGGAAGAC GAGATGAGGC TGATGTATGA GAAAGAGTTT TATGGGAGAG | 2050 |
AGATTGTGAA TGTTGTGGCT TGTGAAGGAA CAGAGAGAGT GGAGAGACCA | 2100 |
GAGACATATA AGCAGTGGCA GGCGAGACTG ATCCGAGCCG GATTTAGACA | 2150 |
GCTTCCGCTT GAGAAGGAAC TGATGCAGAA TCTGAAGTTG AAAATCGAAA | 2200 |
ACGGGTACGA TAAAAACTTC GATGTTGATC AAAACGGTAA CTGGTTACTT | 2250 |
CAAGGGTGGA AAGGTAGAAT CGTGTATGCT TCATCTCTAT GGGTTCCTTC | 2300 |
GTCTTCATAG | 2350 |
>AT1G07530.1 longest ORF length:769
MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP | 50 |
EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME | 100 |
EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS | 150 |
CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS | 200 |
NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK | 250 |
SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL | 300 |
TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI | 350 |
LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC | 400 |
AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT | 450 |
QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT | 500 |
IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV | 550 |
QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR | 600 |
FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE | 650 |
ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP | 700 |
ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL | 750 |
QGWKGRIVYA SSLWVPSSS | 800 |
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