fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G07530 SCL14, ATGRAS2 GRAS \(GAI, RGA, SCR\) 2, ARABIDOPSIS THALIANA GRAS \(GAI, RGA, SCR\) 2, SCARECROW-like 14 (.1)

>AT1G07530.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRV, HpaI, KpnI, NdeI, NotI, PacI, SacI, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 28, 141
BglII A|GATCT 210, 1013, 1352
EcoRI G|AATTC 792
HindIII A|AGCTT 1591, 1756
NcoI C|CATGG 32
NheI G|CTAGC 478, 1995
PstI CTGCA|G 1385
PvuII CAG|CTG 968
SpeI A|CTAGT 1138
StyI C|C[AT][AT]GG 32, 137, 803
XbaI T|CTAGA 1812


Click here to view TAIR data

>AT1G07530.1 length:2310
ATGGGTTCTT ATCCGGATGG ATTCCCTGGA TCCATGGACG AGTTGGATTT 
50
CAATAAGGAC TTTGATTTGC CTCCCTCCTC AAACCAAACC TTAGGTTTAG 
100
CTAATGGGTT CTATTTAGAT GACTTAGATT TCTCATCCTT GGATCCTCCA 
150
GAGGCATATC CCTCCCAGAA CAACAACAAC AACAACATCA ACAACAAAGC 
200
TGTAGCAGGA GATCTGTTAT CATCTTCATC TGATGACGCT GATTTCTCTG 
250
ATTCTGTTTT GAAGTATATA AGCCAAGTTC TTATGGAAGA GGATATGGAA 
300
GAGAAGCCTT GTATGTTTCA TGACGCTTTG GCTCTTCAAG CTGCTGAGAA 
350
ATCTCTCTAT GAGGCTCTTG GTGAGAAATA CCCTTCTTCG TCTTCTGCTT 
400
CTTCTGTGGA TCATCCTGAG AGATTGGCTA GTGATAGCCC TGACGGTTCT 
450
TGTTCAGGTG GTGCTTTTAG TGATTACGCT AGCACCACTA CCACTACTTC 
500
CTCTGATTCT CACTGGAGTG TTGATGGTTT GGAGAATAGA CCTTCTTGGT 
550
TACATACACC TATGCCGAGT AATTTTGTTT TCCAGTCTAC TTCTAGGTCC 
600
AACAGTGTCA CCGGTGGTGG TGGTGGTGGT AATAGTGCGG TTTACGGTTC 
650
AGGTTTTGGC GATGATTTGG TTTCGAATAT GTTTAAAGAT GATGAATTGG 
700
CTATGCAGTT CAAGAAAGGG GTTGAGGAAG CTAGTAAGTT CCTTCCTAAG 
750
TCTTCTCAGC TCTTTATTGA TGTGGATAGT TACATCCCTA TGAATTCTGG 
800
TTCCAAGGAA AATGGTTCTG AGGTTTTTGT TAAGACGGAG AAGAAAGATG 
850
AGACAGAGCA TCATCATCAT CATAGCTATG CTCCTCCTCC CAACAGATTA 
900
ACTGGTAAGA AAAGCCATTG GCGCGACGAA GATGAAGATT TCGTTGAAGA 
950
AAGAAGTAAC AAGCAATCAG CTGTTTATGT TGAGGAAAGC GAGCTTTCTG 
1000
AAATGTTTGA TAAGATCTTG GTATGTGGCC CTGGGAAACC TGTATGCATT 
1050
CTTAACCAGA ACTTTCCTAC AGAATCCGCT AAAGTCGTGA CCGCACAGTC 
1100
AAATGGAGCA AAGATTCGTG GGAAGAAATC AACTTCTACT AGTCATAGTA 
1150
ACGATTCTAA GAAAGAAACT GCTGATTTGA GGACTCTTTT GGTGTTATGT 
1200
GCACAAGCTG TATCAGTGGA TGATCGTAGA ACCGCCAACG AAATGCTAAG 
1250
GCAGATACGA GAGCATTCTT CGCCTCTAGG CAATGGTTCA GAGCGGTTGG 
1300
CTCATTATTT TGCAAATAGT CTTGAAGCAC GCTTAGCTGG GACCGGTACA 
1350
CAGATCTACA CCGCTTTATC TTCGAAGAAA ACGTCTGCAG CAGACATGTT 
1400
GAAGGCTTAC CAGACATACA TGTCGGTCTG CCCTTTCAAG AAAGCTGCTA 
1450
TCATATTTGC TAACCACAGC ATGATGCGTT TCACTGCAAA CGCCAACACG 
1500
ATCCACATAA TAGATTTCGG AATATCTTAC GGTTTTCAGT GGCCTGCTCT 
1550
GATTCATCGC CTCTCGCTCA GCAGACCTGG TGGTTCGCCT AAGCTTCGAA 
1600
TTACCGGTAT AGAGCTTCCT CAGCGCGGTT TTAGACCAGC GGAAGGAGTT 
1650
CAGGAGACAG GTCATCGCTT GGCTCGATAC TGTCAGCGAC ACAATGTTCC 
1700
GTTTGAGTAC AACGCAATTG CTCAGAAATG GGAAACGATC CAAGTCGAAG 
1750
ACTTAAAGCT TCGACAAGGA GAGTATGTGG TTGTGAACTC TTTGTTCCGT 
1800
TTCAGGAACC TTCTAGATGA GACCGTTCTG GTAAACAGCC CGAGAGATGC 
1850
AGTTTTGAAG CTGATAAGAA AAATAAACCC GAATGTCTTC ATTCCAGCGA 
1900
TCTTAAGCGG GAATTACAAC GCGCCATTCT TTGTCACGAG GTTCAGAGAA 
1950
GCGTTGTTTC ATTACTCGGC TGTGTTTGAT ATGTGTGACT CGAAGCTAGC 
2000
TAGGGAAGAC GAGATGAGGC TGATGTATGA GAAAGAGTTT TATGGGAGAG 
2050
AGATTGTGAA TGTTGTGGCT TGTGAAGGAA CAGAGAGAGT GGAGAGACCA 
2100
GAGACATATA AGCAGTGGCA GGCGAGACTG ATCCGAGCCG GATTTAGACA 
2150
GCTTCCGCTT GAGAAGGAAC TGATGCAGAA TCTGAAGTTG AAAATCGAAA 
2200
ACGGGTACGA TAAAAACTTC GATGTTGATC AAAACGGTAA CTGGTTACTT 
2250
CAAGGGTGGA AAGGTAGAAT CGTGTATGCT TCATCTCTAT GGGTTCCTTC 
2300
GTCTTCATAG 
2350

>AT1G07530.1 longest ORF length:769
MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP 
50
EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME 
100
EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS 
150
CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS 
200
NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK 
250
SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL 
300
TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI 
350
LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC 
400
AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT 
450
QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT 
500
IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV 
550
QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR 
600
FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE 
650
ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP 
700
ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL 
750
QGWKGRIVYA SSLWVPSSS
800