Locus |
Common name |
Short description |
AT1G07640 |
OBP2, AtDof1. 1 |
Dof-type zinc finger DNA-binding family protein (.1.2.3) |
>AT1G07640.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
639 |
NcoI
| C|CATGG |
462, 659 |
StyI
| C|C[AT][AT]GG |
462, 659 |
XbaI
| T|CTAGA |
730 |
Click here to view TAIR data
>AT1G07640.1 length:828
ATGGGTGGAT CGATGGCGGA GAGAGCAAGG CAGGCCAACA TTCCTCCACT | 50 |
AGCGGGACCC CTAAAGTGTC CTCGATGCGA CTCCAGCAAC ACTAAGTTCT | 100 |
GTTACTACAA CAACTATAAC CTCACTCAGC CTCGTCACTT CTGCAAAGGT | 150 |
TGCCGTCGCT ACTGGACACA AGGGGGCGCC CTGAGAAACG TCCCTGTAGG | 200 |
TGGAGGCTGC CGGAGGAATA ACAAGAAGGG CAAAAATGGA AATTTAAAAT | 250 |
CTTCTTCTTC TTCGTCCAAA CAGTCTTCCT CGGTCAACGC TCAAAGTCCT | 300 |
AGCTCAGGAC AGCTAAGGAC AAATCATCAG TTCCCTTTTT CACCAACTCT | 350 |
TTACAATCTC ACTCAACTCG GAGGTATTGG TTTGAACTTA GCCGCTACTA | 400 |
ATGGCAACAA CCAAGCTCAC CAGATCGGTT CCAGTTTGAT GATGAGCGAT | 450 |
CTAGGGTTTC TCCATGGACG AAATACTTCA ACTCCGATGA CGGGAAACAT | 500 |
TCATGAAAAC AACAACAATA ATAACAATGA AAACAACCTA ATGGCATCCG | 550 |
TTGGATCTTT GAGCCCCTTT GCTCTCTTCG ATCCAACGAC GGGGCTATAC | 600 |
GCTTTCCAGA ACGACGGTAA TATCGGGAAC AACGTTGGGA TATCTGGTTC | 650 |
TTCTACTTCC ATGGTTGATT CTAGGGTTTA TCAGACGCCT CCGGTGAAGA | 700 |
TGGAAGAACA ACCTAATTTG GCTAACTTGT CTAGACCGGT CTCCGGTTTG | 750 |
ACGTCTCCTG GGAATCAAAC AAATCAGTAC TTTTGGCCTG GTTCGGATTT | 800 |
CTCGGGTCCT TCTAATGATC TCTTGTGA | 850 |
>AT1G07640.1 longest ORF length:275
MGGSMAERAR QANIPPLAGP LKCPRCDSSN TKFCYYNNYN LTQPRHFCKG | 50 |
CRRYWTQGGA LRNVPVGGGC RRNNKKGKNG NLKSSSSSSK QSSSVNAQSP | 100 |
SSGQLRTNHQ FPFSPTLYNL TQLGGIGLNL AATNGNNQAH QIGSSLMMSD | 150 |
LGFLHGRNTS TPMTGNIHEN NNNNNNENNL MASVGSLSPF ALFDPTTGLY | 200 |
AFQNDGNIGN NVGISGSSTS MVDSRVYQTP PVKMEEQPNL ANLSRPVSGL | 250 |
TSPGNQTNQY FWPGSDFSGP SNDLL | 300 |
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