fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G07640 OBP2, AtDof1. 1 Dof-type zinc finger DNA-binding family protein (.1.2.3)

>AT1G07640.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 639
NcoI C|CATGG 462, 659
StyI C|C[AT][AT]GG 462, 659
XbaI T|CTAGA 730


Click here to view TAIR data

>AT1G07640.1 length:828
ATGGGTGGAT CGATGGCGGA GAGAGCAAGG CAGGCCAACA TTCCTCCACT 
50
AGCGGGACCC CTAAAGTGTC CTCGATGCGA CTCCAGCAAC ACTAAGTTCT 
100
GTTACTACAA CAACTATAAC CTCACTCAGC CTCGTCACTT CTGCAAAGGT 
150
TGCCGTCGCT ACTGGACACA AGGGGGCGCC CTGAGAAACG TCCCTGTAGG 
200
TGGAGGCTGC CGGAGGAATA ACAAGAAGGG CAAAAATGGA AATTTAAAAT 
250
CTTCTTCTTC TTCGTCCAAA CAGTCTTCCT CGGTCAACGC TCAAAGTCCT 
300
AGCTCAGGAC AGCTAAGGAC AAATCATCAG TTCCCTTTTT CACCAACTCT 
350
TTACAATCTC ACTCAACTCG GAGGTATTGG TTTGAACTTA GCCGCTACTA 
400
ATGGCAACAA CCAAGCTCAC CAGATCGGTT CCAGTTTGAT GATGAGCGAT 
450
CTAGGGTTTC TCCATGGACG AAATACTTCA ACTCCGATGA CGGGAAACAT 
500
TCATGAAAAC AACAACAATA ATAACAATGA AAACAACCTA ATGGCATCCG 
550
TTGGATCTTT GAGCCCCTTT GCTCTCTTCG ATCCAACGAC GGGGCTATAC 
600
GCTTTCCAGA ACGACGGTAA TATCGGGAAC AACGTTGGGA TATCTGGTTC 
650
TTCTACTTCC ATGGTTGATT CTAGGGTTTA TCAGACGCCT CCGGTGAAGA 
700
TGGAAGAACA ACCTAATTTG GCTAACTTGT CTAGACCGGT CTCCGGTTTG 
750
ACGTCTCCTG GGAATCAAAC AAATCAGTAC TTTTGGCCTG GTTCGGATTT 
800
CTCGGGTCCT TCTAATGATC TCTTGTGA
850

>AT1G07640.1 longest ORF length:275
MGGSMAERAR QANIPPLAGP LKCPRCDSSN TKFCYYNNYN LTQPRHFCKG 
50
CRRYWTQGGA LRNVPVGGGC RRNNKKGKNG NLKSSSSSSK QSSSVNAQSP 
100
SSGQLRTNHQ FPFSPTLYNL TQLGGIGLNL AATNGNNQAH QIGSSLMMSD 
150
LGFLHGRNTS TPMTGNIHEN NNNNNNENNL MASVGSLSPF ALFDPTTGLY 
200
AFQNDGNIGN NVGISGSSTS MVDSRVYQTP PVKMEEQPNL ANLSRPVSGL 
250
TSPGNQTNQY FWPGSDFSGP SNDLL
300