fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G07640 OBP2, AtDof1. 1 Dof-type zinc finger DNA-binding family protein (.1.2.3)

>AT1G07640.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 9
EcoRV GAT|ATC 807
NcoI C|CATGG 630, 827
SpeI A|CTAGT 78
StyI C|C[AT][AT]GG 630, 827
XbaI T|CTAGA 898


Click here to view TAIR data

>AT1G07640.2 length:996
ATGCCTACGA ATTCGAATCA TCAGCATCAT CTTCAACACC AGCTTAACGA 
50
AAATGGAAGT ATAATAAGTG GCCACGGACT AGTACTCTCT CACCAACTTC 
100
CACCTCTCCA AGCAAACCCT AACCCTAACC ACCACCATGT CGCTACCTCT 
150
GCTGGTCTTC CGTCAAGGAT GGGTGGATCG ATGGCGGAGA GAGCAAGGCA 
200
GGCCAACATT CCTCCACTAG CGGGACCCCT AAAGTGTCCT CGATGCGACT 
250
CCAGCAACAC TAAGTTCTGT TACTACAACA ACTATAACCT CACTCAGCCT 
300
CGTCACTTCT GCAAAGGTTG CCGTCGCTAC TGGACACAAG GGGGCGCCCT 
350
GAGAAACGTC CCTGTAGGTG GAGGCTGCCG GAGGAATAAC AAGAAGGGCA 
400
AAAATGGAAA TTTAAAATCT TCTTCTTCTT CGTCCAAACA GTCTTCCTCG 
450
GTCAACGCTC AAAGTCCTAG CTCAGGACAG CTAAGGACAA ATCATCAGTT 
500
CCCTTTTTCA CCAACTCTTT ACAATCTCAC TCAACTCGGA GGTATTGGTT 
550
TGAACTTAGC CGCTACTAAT GGCAACAACC AAGCTCACCA GATCGGTTCC 
600
AGTTTGATGA TGAGCGATCT AGGGTTTCTC CATGGACGAA ATACTTCAAC 
650
TCCGATGACG GGAAACATTC ATGAAAACAA CAACAATAAT AACAATGAAA 
700
ACAACCTAAT GGCATCCGTT GGATCTTTGA GCCCCTTTGC TCTCTTCGAT 
750
CCAACGACGG GGCTATACGC TTTCCAGAAC GACGGTAATA TCGGGAACAA 
800
CGTTGGGATA TCTGGTTCTT CTACTTCCAT GGTTGATTCT AGGGTTTATC 
850
AGACGCCTCC GGTGAAGATG GAAGAACAAC CTAATTTGGC TAACTTGTCT 
900
AGACCGGTCT CCGGTTTGAC GTCTCCTGGG AATCAAACAA ATCAGTACTT 
950
TTGGCCTGGT TCGGATTTCT CGGGTCCTTC TAATGATCTC TTGTGA
1000

>AT1G07640.2 longest ORF length:331
MPTNSNHQHH LQHQLNENGS IISGHGLVLS HQLPPLQANP NPNHHHVATS 
50
AGLPSRMGGS MAERARQANI PPLAGPLKCP RCDSSNTKFC YYNNYNLTQP 
100
RHFCKGCRRY WTQGGALRNV PVGGGCRRNN KKGKNGNLKS SSSSSKQSSS 
150
VNAQSPSSGQ LRTNHQFPFS PTLYNLTQLG GIGLNLAATN GNNQAHQIGS 
200
SLMMSDLGFL HGRNTSTPMT GNIHENNNNN NNENNLMASV GSLSPFALFD 
250
PTTGLYAFQN DGNIGNNVGI SGSSTSMVDS RVYQTPPVKM EEQPNLANLS 
300
RPVSGLTSPG NQTNQYFWPG SDFSGPSNDL L
350