fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G07640 OBP2, AtDof1. 1 Dof-type zinc finger DNA-binding family protein (.1.2.3)

>AT1G07640.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 33
EcoRV GAT|ATC 831
NcoI C|CATGG 654, 851
SpeI A|CTAGT 102
StyI C|C[AT][AT]GG 654, 851
XbaI T|CTAGA 922


Click here to view TAIR data

>AT1G07640.3 length:1020
ATGGCTTTCC CATCTAATTG GTCACAGCCT ACGAATTCGA ATCATCAGCA 
50
TCATCTTCAA CACCAGCTTA ACGAAAATGG AAGTATAATA AGTGGCCACG 
100
GACTAGTACT CTCTCACCAA CTTCCACCTC TCCAAGCAAA CCCTAACCCT 
150
AACCACCACC ATGTCGCTAC CTCTGCTGGT CTTCCGTCAA GGATGGGTGG 
200
ATCGATGGCG GAGAGAGCAA GGCAGGCCAA CATTCCTCCA CTAGCGGGAC 
250
CCCTAAAGTG TCCTCGATGC GACTCCAGCA ACACTAAGTT CTGTTACTAC 
300
AACAACTATA ACCTCACTCA GCCTCGTCAC TTCTGCAAAG GTTGCCGTCG 
350
CTACTGGACA CAAGGGGGCG CCCTGAGAAA CGTCCCTGTA GGTGGAGGCT 
400
GCCGGAGGAA TAACAAGAAG GGCAAAAATG GAAATTTAAA ATCTTCTTCT 
450
TCTTCGTCCA AACAGTCTTC CTCGGTCAAC GCTCAAAGTC CTAGCTCAGG 
500
ACAGCTAAGG ACAAATCATC AGTTCCCTTT TTCACCAACT CTTTACAATC 
550
TCACTCAACT CGGAGGTATT GGTTTGAACT TAGCCGCTAC TAATGGCAAC 
600
AACCAAGCTC ACCAGATCGG TTCCAGTTTG ATGATGAGCG ATCTAGGGTT 
650
TCTCCATGGA CGAAATACTT CAACTCCGAT GACGGGAAAC ATTCATGAAA 
700
ACAACAACAA TAATAACAAT GAAAACAACC TAATGGCATC CGTTGGATCT 
750
TTGAGCCCCT TTGCTCTCTT CGATCCAACG ACGGGGCTAT ACGCTTTCCA 
800
GAACGACGGT AATATCGGGA ACAACGTTGG GATATCTGGT TCTTCTACTT 
850
CCATGGTTGA TTCTAGGGTT TATCAGACGC CTCCGGTGAA GATGGAAGAA 
900
CAACCTAATT TGGCTAACTT GTCTAGACCG GTCTCCGGTT TGACGTCTCC 
950
TGGGAATCAA ACAAATCAGT ACTTTTGGCC TGGTTCGGAT TTCTCGGGTC 
1000
CTTCTAATGA TCTCTTGTGA 
1050

>AT1G07640.3 longest ORF length:339
MAFPSNWSQP TNSNHQHHLQ HQLNENGSII SGHGLVLSHQ LPPLQANPNP 
50
NHHHVATSAG LPSRMGGSMA ERARQANIPP LAGPLKCPRC DSSNTKFCYY 
100
NNYNLTQPRH FCKGCRRYWT QGGALRNVPV GGGCRRNNKK GKNGNLKSSS 
150
SSSKQSSSVN AQSPSSGQLR TNHQFPFSPT LYNLTQLGGI GLNLAATNGN 
200
NQAHQIGSSL MMSDLGFLHG RNTSTPMTGN IHENNNNNNN ENNLMASVGS 
250
LSPFALFDPT TGLYAFQNDG NIGNNVGISG SSTSMVDSRV YQTPPVKMEE 
300
QPNLANLSRP VSGLTSPGNQ TNQYFWPGSD FSGPSNDLL
350