Locus |
Common name |
Short description |
AT1G07980 |
NF-YC10 |
"nuclear factor Y, subunit C10", nuclear factor Y, subunit C10 (.1) |
>AT1G07980.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
152 |
EcoRI
| G|AATTC |
260 |
HindIII
| A|AGCTT |
449 |
HpaI
| GTT|AAC |
118 |
StyI
| C|C[AT][AT]GG |
20 |
Click here to view TAIR data
>AT1G07980.1 length:621
ATGGTGTCGT CAAAGAAACC CAAGGAGAAG AAGGCGAGGA GCGATGTCGT | 50 |
CGTCAATAAA GCGAGTGGTC GGAGTAAACG CAGCTCCGGT TCCAGAACGA | 100 |
AGAAGACGTC GAACAAGGTT AACATTGTGA AGAAGAAGCC GGAGATTTAC | 150 |
GAGATCTCAG AATCATCGAG CAGTGACTCT GTGGAAGAAG CAATAAGAGG | 200 |
CGATGAGGCG AAGAAAAGTA ACGGCGTCGT GAGCAAGAGG GGTAACGGAA | 250 |
AGAGTGTAGG AATTCCGACG AAGACGAGTA AAAATCGAGA AGAGGACGAT | 300 |
GGAGGCGCGG AAGATGCTAA GATCAAGTTT CCGATGAATC GGATTCGGCG | 350 |
GATCATGAGA AGCGATAATT CTGCTCCTCA GATTATGCAG GATGCTGTAT | 400 |
TTCTTGTCAA CAAAGCCACG GAGATGTTCA TTGAGCGGTT TTCTGAAGAA | 450 |
GCTTATGATA GTTCCGTCAA GGACAAAAAG AAATTCATCC ACTACAAACA | 500 |
CCTCTCATCC GTAGTGAGTA ACGACCAGAG ATACGAGTTC CTTGCAGATA | 550 |
GTGTTCCCGA GAAACTTAAA GCAGAGGCCG CGTTGGAGGA ATGGGAAAGA | 600 |
GGCATGACAG ATGCAGGCTG A | 650 |
>AT1G07980.1 longest ORF length:206
MVSSKKPKEK KARSDVVVNK ASGRSKRSSG SRTKKTSNKV NIVKKKPEIY | 50 |
EISESSSSDS VEEAIRGDEA KKSNGVVSKR GNGKSVGIPT KTSKNREEDD | 100 |
GGAEDAKIKF PMNRIRRIMR SDNSAPQIMQ DAVFLVNKAT EMFIERFSEE | 150 |
AYDSSVKDKK KFIHYKHLSS VVSNDQRYEF LADSVPEKLK AEAALEEWER | 200 |
GMTDAG | 250 |
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