Locus |
Common name |
Short description |
AT1G08000 |
GATA10 |
GATA transcription factor 10 (.1.2) |
>AT1G08000.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
331, 886 |
StyI
| C|C[AT][AT]GG |
167, 212 |
XhoI
| C|TCGAG |
379 |
Click here to view TAIR data
>AT1G08000.1 length:927
ATGAATTGGT TACCTGAAGC TGAAGCTGAG GAGCACTTGA AAGGTATTCT | 50 |
CTCTGGTGAT TTCTTTGATG GTCTCACCAA TCACCTTGAT TGCCCACTTG | 100 |
AAGACATCGA TTCCACCAAT GGTGAGGGAG ATTGGGTCGC CAGGTTTCAA | 150 |
GACCTTGAGC CTCCTCCCTT GGATATGTTC CCTGCTTTGC CTTCTGACCT | 200 |
CACCTCTTGT CCCAAGGGCG CCGCTCGTGT GCGGATTCCC AACAACATGA | 250 |
TTCCTGCTTT GAAGCAGTCC TGTTCTTCTG AAGCCTTGTC CGGCATTAAT | 300 |
AGCACTCCCC ACCAATCTTC AGCTCCTCCT GATATCAAAG TTTCATATCT | 350 |
ATTTCAGTCT CTAACTCCAG TGTCAGTTCT CGAGAACAGT TATGGTTCTC | 400 |
TCTCCACCCA AAACTCCGGA TCTCAGAGAT TGGCTTTCCC TGTGAAAGGC | 450 |
ATGAGAAGCA AGCGCAGACG CCCCACAACA GTGAGACTTA GCTACCTTTT | 500 |
CCCCTTTGAA CCCAGAAAGT CAACTCCGGG TGAATCAGTA ACCGAGGGTT | 550 |
ACTATTCTTC TGAGCAACAT GCCAAGAAGA AGCGCAAGAT TCATCTGATC | 600 |
ACCCACACCG AGTCTTCCAC TTTGGAGTCA AGTAAGTCGG ATGGGATAGT | 650 |
CCGGATATGC ACTCATTGTG AGACAATCAC GACCCCACAG TGGAGGCAAG | 700 |
GACCCAGTGG ACCCAAGACC CTCTGCAACG CTTGCGGAGT CCGGTTCAAA | 750 |
TCTGGTCGCC TAGTTCCAGA ATACCGGCCA GCCTCAAGCC CGACCTTCAT | 800 |
CCCATCTGTG CATTCAAACT CACACAGGAA GATCATTGAG ATGAGAAAGA | 850 |
AGGACGACGA GTTTGATACC AGCATGATTC GCAGTGATAT CCAGAAGGTA | 900 |
AAGCAGGGGA GGAAGAAAAT GGTATAA | 950 |
>AT1G08000.1 longest ORF length:308
MNWLPEAEAE EHLKGILSGD FFDGLTNHLD CPLEDIDSTN GEGDWVARFQ | 50 |
DLEPPPLDMF PALPSDLTSC PKGAARVRIP NNMIPALKQS CSSEALSGIN | 100 |
STPHQSSAPP DIKVSYLFQS LTPVSVLENS YGSLSTQNSG SQRLAFPVKG | 150 |
MRSKRRRPTT VRLSYLFPFE PRKSTPGESV TEGYYSSEQH AKKKRKIHLI | 200 |
THTESSTLES SKSDGIVRIC THCETITTPQ WRQGPSGPKT LCNACGVRFK | 250 |
SGRLVPEYRP ASSPTFIPSV HSNSHRKIIE MRKKDDEFDT SMIRSDIQKV | 300 |
KQGRKKMV | 350 |
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