fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G08290 WIP3 WIP domain protein 3 (.1)

>AT1G08290.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 3
EcoRV GAT|ATC 268
HindIII A|AGCTT 42, 865
NdeI CA|TATG 592
StyI C|C[AT][AT]GG 818


Click here to view TAIR data

>AT1G08290.1 length:1014
ATGAATTCTT ATGAGACGAA AGGCTTAAGT TTCGAATCCC CAAGCTTTAT 
50
TGAATGGCTT AAACCTCAAT CTTCTACTAC TTCTTCTAAA TCTGTGTTAT 
100
ATCGTGGGAA GACAAGAGAT GCTATATCAA GATCAAATCA CCACCAGAGT 
150
CAGATGAACA TGTTGGAACG ATCTCTATTC TTGTACCAAC CACAAGAACC 
200
ACTCAACACG TCTATTCAAT GCTTGCCTCT TCTAAACAAG CTCATGGAAA 
250
ATAATAGTCA AGCCTCGGAT ATCAAAGAAG AGAATAAGGA TGATGTGGTT 
300
ACCCTCCAAA TCGGATTTCC TAAATACCAC CGTGGTAGCT CGGAGGATGG 
350
CTCTGATATA ACTTTCGATC ATCAGAAGAA ACCCATCAAG AGAGAGATAA 
400
TAGAAGATGG TGTGGTGATG ATGAAGAAGA GGAGGAAGAT GAAGTTTGAT 
450
GAGGAGATAA TTGATTCTGA TGTGGAAGTA TGTGGGAAGA GGTTTTGGAT 
500
ACCAAGTCCG GCTCAGATTC ATGTCGGTCC AATGCAATTT GCTTGCTCTA 
550
TTTGCAGCAA AACATTCAAT AGGTACAATA ACATGCAGAT GCATATGTGG 
600
GGACATGGAT CTGAGTTCAG AAAAGGGGCT GACTCGTTGA AAGGCACAAT 
650
CCAACCGGCA GCCATCCTGC GGCTGCCATG CTATTGCTGT GCCGAGGGAT 
700
GCAAGAACAA CATCAACCAT CCGCGGTCCA AGCCCCTGAA AGATTTCCGT 
750
ACACTTCAGA CACATTACAA ACGTAAGCAT GGCTCCAAGC CCTTTTCTTG 
800
CGGAAAATGT GGCAAAGCCT TGGCTGTGAA AGGCGACTGG AGGACCCATG 
850
AGAAAAACTG CGGAAAGCTT TGGTATTGTA CATGTGGATC AGATTTCAAG 
900
CATAAGAGGT CTCTCAAGGA CCACATTAGG TCCTTTGGCA GTGGACATTC 
950
TCCTCACCCG TCTCTTTTGT TTGACGGTTT TGAGGAGGAT ACAGAATGCG 
1000
TCACCACAGA GTGA
1050

>AT1G08290.1 longest ORF length:337
MNSYETKGLS FESPSFIEWL KPQSSTTSSK SVLYRGKTRD AISRSNHHQS 
50
QMNMLERSLF LYQPQEPLNT SIQCLPLLNK LMENNSQASD IKEENKDDVV 
100
TLQIGFPKYH RGSSEDGSDI TFDHQKKPIK REIIEDGVVM MKKRRKMKFD 
150
EEIIDSDVEV CGKRFWIPSP AQIHVGPMQF ACSICSKTFN RYNNMQMHMW 
200
GHGSEFRKGA DSLKGTIQPA AILRLPCYCC AEGCKNNINH PRSKPLKDFR 
250
TLQTHYKRKH GSKPFSCGKC GKALAVKGDW RTHEKNCGKL WYCTCGSDFK 
300
HKRSLKDHIR SFGSGHSPHP SLLFDGFEED TECVTTE
350