fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G08320 TGA9, bZIP21 TGACG \(TGA\) motif-binding protein 9, bZIP transcription factor family protein (.1.2.3)

>AT1G08320.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 812
HindIII A|AGCTT 256
NdeI CA|TATG 403
PvuII CAG|CTG 874
SacI GAGCT|C 287, 950


Click here to view TAIR data

>AT1G08320.2 length:1074
ATGAGTAGCA AACATCATCT CATGCTTCAA CCTCATCATA ATAACATGGC 
50
AAACTCAAGT TCAACATCTG GACTTCCTTC CACTTCTCGA ACTTTAGCTC 
100
CTCCTAAACC TTCGGAAGAT AAGAGGAAGG CTACAACTTC AGGCAAACAG 
150
CTTGATGCTA AGACGTTGAG ACGTTTGGCC CAAAATAGAG AAGCTGCTCG 
200
CAAAAGCCGT CTTAGGAAAA AGGCGTATGT GCAACAGCTA GAATCAAGTA 
250
GGATAAAGCT TTCCCAATTG GAGCAAGAAC TTCAGCGAGC TCGTTCTCAG 
300
GGGCTGTTCA TGGGTGGTTG TGGACCACCA GGACCTAACA TCACTTCCGG 
350
AGCTGCAATA TTTGACATGG AATATGGGAG ATGGCTAGAG GATGATAACC 
400
GGCATATGTC GGAGATTCGA ACCGGTCTTC AGGCTCATTT ATCTGACAAT 
450
GATTTAAGGT TGATCGTTGA CGGTTACATT GCTCATTTTG ATGAGATATT 
500
CCGATTAAAA GCCGTGGCAG CGAAAGCCGA TGTTTTTCAC CTCATCATTG 
550
GGACATGGAT GTCCCCAGCC GAACGTTGTT TTATTTGGAT GGCTGGTTTC 
600
CGTCCATCCG ACCTAATCAA GATATTGGTG TCGCAAATGG ATCTATTGAC 
650
GGAGCAACAA CTGATGGGAA TATATAGCCT ACAACACTCG TCGCAACAAG 
700
CAGAGGAGGC TCTCTCGCAA GGCCTCGAAC AACTTCAGCA ATCTCTCATC 
750
GATACTCTCG CCGCATCTCC AGTCATTGAC GGAATGCAAC AAATGGCTGT 
800
CGCTCTCGGA AAGATCTCTA ATCTCGAAGG CTTTATCCGC CAGGCTGATA 
850
ACTTGAGGCA GCAGACCGTT CACCAGCTGA GGCGGATCTT GACCGTCCGA 
900
CAAGCTGCAC GGTGTTTCCT AGTCATCGGA GAGTACTATG GACGGCTCAG 
950
AGCTCTTAGC TCCCTTTGGT TGTCACGCCC ACGAGAGACA CTGATGAGTG 
1000
ATGAAACCTC TTGTCAAACG ACGACGGATT TGCAGATTGT TCAGTCATCT 
1050
CGGAACCACT TCTCCAATTT CTGA
1100

>AT1G08320.2 longest ORF length:357
MSSKHHLMLQ PHHNNMANSS STSGLPSTSR TLAPPKPSED KRKATTSGKQ 
50
LDAKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIKLSQL EQELQRARSQ 
100
GLFMGGCGPP GPNITSGAAI FDMEYGRWLE DDNRHMSEIR TGLQAHLSDN 
150
DLRLIVDGYI AHFDEIFRLK AVAAKADVFH LIIGTWMSPA ERCFIWMAGF 
200
RPSDLIKILV SQMDLLTEQQ LMGIYSLQHS SQQAEEALSQ GLEQLQQSLI 
250
DTLAASPVID GMQQMAVALG KISNLEGFIR QADNLRQQTV HQLRRILTVR 
300
QAARCFLVIG EYYGRLRALS SLWLSRPRET LMSDETSCQT TTDLQIVQSS 
350
RNHFSNF
400