fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G08320 TGA9, bZIP21 TGACG \(TGA\) motif-binding protein 9, bZIP transcription factor family protein (.1.2.3)

>AT1G08320.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 1184
HindIII A|AGCTT 628
NdeI CA|TATG 775
PvuII CAG|CTG 1246
SacI GAGCT|C 659, 1322


Click here to view TAIR data

>AT1G08320.3 length:1446
ATGGCGAACC ATAGAATGAG CGAAGCTACA AACCATAACC ACAATCATCA 
50
TCTTCCTTAT TCACTTATTC ATGGTCTCAA CAACAATCAT CCATCTTCTG 
100
GTTTCATTAA CCAAGATGGA TCGTCCAGTT TCGATTTTGG AGAGCTAGAA 
150
GAAGCAATTG TTCTGCAAGG TGTCAAGTAT AGGAACGAGG AAGCCAAGCC 
200
ACCTTTATTA GGAGGAGGAG GAGGAGCTAC GACTCTGGAG ATGTTCCCTT 
250
CGTGGCCAAT CAGAACTCAC CAAACTCTTC CTACTGAGAG TTCCAAGTCA 
300
GGAGGAGAGA GCAGCGATTC AGGATCGGCT AATTTCTCCG GCAAAGCTGA 
350
AAGTCAACAA CCGGAGTCTC CTATGAGTAG CAAACATCAT CTCATGCTTC 
400
AACCTCATCA TAATAACATG GCAAACTCAA GTTCAACATC TGGACTTCCT 
450
TCCACTTCTC GAACTTTAGC TCCTCCTAAA CCTTCGGAAG ATAAGAGGAA 
500
GGCTACAACT TCAGGCAAAC AGCTTGATGC TAAGACGTTG AGACGTTTGG 
550
CCCAAAATAG AGAAGCTGCT CGCAAAAGCC GTCTTAGGAA AAAGGCGTAT 
600
GTGCAACAGC TAGAATCAAG TAGGATAAAG CTTTCCCAAT TGGAGCAAGA 
650
ACTTCAGCGA GCTCGTTCTC AGGGGCTGTT CATGGGTGGT TGTGGACCAC 
700
CAGGACCTAA CATCACTTCC GGAGCTGCAA TATTTGACAT GGAATATGGG 
750
AGATGGCTAG AGGATGATAA CCGGCATATG TCGGAGATTC GAACCGGTCT 
800
TCAGGCTCAT TTATCTGACA ATGATTTAAG GTTGATCGTT GACGGTTACA 
850
TTGCTCATTT TGATGAGATA TTCCGATTAA AAGCCGTGGC AGCGAAAGCC 
900
GATGTTTTTC ACCTCATCAT TGGGACATGG ATGTCCCCAG CCGAACGTTG 
950
TTTTATTTGG ATGGCTGGTT TCCGTCCATC CGACCTAATC AAGATATTGG 
1000
TGTCGCAAAT GGATCTATTG ACGGAGCAAC AACTGATGGG AATATATAGC 
1050
CTACAACACT CGTCGCAACA AGCAGAGGAG GCTCTCTCGC AAGGCCTCGA 
1100
ACAACTTCAG CAATCTCTCA TCGATACTCT CGCCGCATCT CCAGTCATTG 
1150
ACGGAATGCA ACAAATGGCT GTCGCTCTCG GAAAGATCTC TAATCTCGAA 
1200
GGCTTTATCC GCCAGGCTGA TAACTTGAGG CAGCAGACCG TTCACCAGCT 
1250
GAGGCGGATC TTGACCGTCC GACAAGCTGC ACGGTGTTTC CTAGTCATCG 
1300
GAGAGTACTA TGGACGGCTC AGAGCTCTTA GCTCCCTTTG GTTGTCACGC 
1350
CCACGAGAGA CACTGATGAG TGATGAAACC TCTTGTCAAA CGACGACGGA 
1400
TTTGCAGATT GTTCAGTCAT CTCGGAACCA CTTCTCCAAT TTCTGA
1450

>AT1G08320.3 longest ORF length:481
MANHRMSEAT NHNHNHHLPY SLIHGLNNNH PSSGFINQDG SSSFDFGELE 
50
EAIVLQGVKY RNEEAKPPLL GGGGGATTLE MFPSWPIRTH QTLPTESSKS 
100
GGESSDSGSA NFSGKAESQQ PESPMSSKHH LMLQPHHNNM ANSSSTSGLP 
150
STSRTLAPPK PSEDKRKATT SGKQLDAKTL RRLAQNREAA RKSRLRKKAY 
200
VQQLESSRIK LSQLEQELQR ARSQGLFMGG CGPPGPNITS GAAIFDMEYG 
250
RWLEDDNRHM SEIRTGLQAH LSDNDLRLIV DGYIAHFDEI FRLKAVAAKA 
300
DVFHLIIGTW MSPAERCFIW MAGFRPSDLI KILVSQMDLL TEQQLMGIYS 
350
LQHSSQQAEE ALSQGLEQLQ QSLIDTLAAS PVIDGMQQMA VALGKISNLE 
400
GFIRQADNLR QQTVHQLRRI LTVRQAARCF LVIGEYYGRL RALSSLWLSR 
450
PRETLMSDET SCQTTTDLQI VQSSRNHFSN F
500