fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G08810 ATMYB60 myb domain protein 60 (.1.2)

>AT1G08810.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 430
EcoRI G|AATTC 660
EcoRV GAT|ATC 64, 307
NcoI C|CATGG 46
SacI GAGCT|C 823
StyI C|C[AT][AT]GG 46


Click here to view TAIR data

>AT1G08810.1 length:843
ATGGGTAGGC CTCCATGCTG TGACAAGATA GGGATCAAGA AAGGACCATG 
50
GACTCCTGAA GAAGATATCA TTCTTGTTTC TTACATTCAA GAACATGGTC 
100
CTGGAAACTG GAGATCAGTT CCCACCAACA CTGGGTTATT GAGATGCAGC 
150
AAAAGTTGTA GACTGAGATG GACAAATTAT CTGAGACCTG GAATTAAACG 
200
TGGAAACTTT ACTCCTCATG AAGAAGGAAT GATCATTCAC TTGCAAGCCT 
250
TATTGGGTAA CAAATGGGCG TCCATAGCTT CATACCTACC ACAAAGAACG 
300
GACAATGATA TCAAGAACTA CTGGAACACA CATTTAAAGA AGAAGCTCAA 
350
CAAGTCTGAC AGTGATGAGA GGAGCAGATC AGAGAACATT GCGCTGCAAA 
400
CTTCTTCGAC AAGAAACACC ATTAATCATA GATCTACCTA TGCTTCAAGC 
450
ACCGAAAACA TTTCCCGCCT TCTTGAGGGT TGGATGAGAG CGTCTCCAAA 
500
GAGTAGTACA AGTACTACTT TCTTGGAACA CAAAATGCAG AACCGGACAA 
550
ACAATTTCAT CGATCATCAC AGCGATCAGT TTCCATACGA GCAGCTTCAA 
600
GGTTCTTGGG AAGAGGGTCA TAGCAAAGGA ATCAACGGGG ATGATGACCA 
650
GGGTATAAAG AATTCAGAGA ATAACAACGG TGATGATGTT CATCATGAAG 
700
ATGGTGATCA TGAGGATGAT GATGATCATA ATGCTACACC ACCATTGACA 
750
TTTATTGAGA AATGGCTTTT GGAGGAAACA AGTACTACTG GGGGTCAAAT 
800
GGAAGAGATG AGCCACTTGA TGGAGCTCTC TAATATGCTT TAA
850

>AT1G08810.1 longest ORF length:280
MGRPPCCDKI GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS 
50
KSCRLRWTNY LRPGIKRGNF TPHEEGMIIH LQALLGNKWA SIASYLPQRT 
100
DNDIKNYWNT HLKKKLNKSD SDERSRSENI ALQTSSTRNT INHRSTYASS 
150
TENISRLLEG WMRASPKSST STTFLEHKMQ NRTNNFIDHH SDQFPYEQLQ 
200
GSWEEGHSKG INGDDDQGIK NSENNNGDDV HHEDGDHEDD DDHNATPPLT 
250
FIEKWLLEET STTGGQMEEM SHLMELSNML 
300