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| Locus | Common name | Short description |
| AT1G08970 | NF-YC9, HAP5C | "nuclear factor Y, subunit C9", HEME ACTIVATED PROTEIN 5C, nuclear factor Y, subunit C9 (.1.2.3.4) |
>AT1G08970.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspMI, BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstBI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, EaeI, EagI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HindIII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, N.BstNBI, NaeI, , NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PvuI, RsaI, RsrII, SacI, SacII, SalI, SapI, ScaI, SexAI, SfaNI, SfiI, SgrAI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Taqƒ¿I, TliI, Tth111I, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| AluI | AG|CT | 28, 117, 159, 171, 348, 526 |
| AlwNI | CAGNNN|CTG | 569 |
| AvaI | C|PyCGPuG | 470 |
| BanI | G|GPyPuCC | 306, 666 |
| BfaI | C|TAG | 429 |
| BsaBI | GATNN|NNATC | 340 |
| BsaHI | GPu|CGPyC | 306 |
| BsaJI | C|CNNGG | 15, 469, 508 |
| BsiHKAI | G[AT]GC[AT]|C | 72 |
| BslI | CCNNNNN|NNGG | 377, 639 |
| BsoBI | C|PyCGPuG | 470 |
| Bsp1286I | G[GAT]GC[CAT]|C | 72, 513 |
| BspHI | T|CATGA | 266 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 306, 666 |
| BssKI | |CCNGG | 111, 344, 469, 521, 588, 609, 683 |
| BstAPI | GCANNNN|NTGC | 99, 570 |
| BstEII | G|GTNACC | 542 |
| BstF5I | GGATGNN| | 277 |
| BstNI | CC|[AT]GG | 111, 344, 683 |
| BstYI | Pu|GATCPy | 134, 477 |
| BtgI | C|CPuPyGG | 15 |
| Cac8I | GCN|NGC | 116, 162, 561 |
| DdeI | C|TNAG | 301, 357, 376 |
| DpnI | GA-CH3|TC | 2, 133, 292, 476 |
| DpnII | |GATC | 2, 133, 292, 476 |
| DrdI | GACNNNN|NNGTC | 360 |
| EcoO109I | PuG|GNCCPy | 326 |
| Fnu4HI | GC|NGC | 81, 102, 143, 149, 170, 417, 528, 534 |
| HaeII | PuGCGC|Py | 306 |
| HaeIII | GG|CC | 113, 325 |
| HhaI | GCG|C | 305 |
| HinP1I | G|CGC | 305 |
| HincII | GTPy|PuAC | 644 |
| HinfI | G|ANTC | 253 |
| HpaII | C|CGG | 469, 521, 587, 609 |
| Hpy188I | TCN|GA | 481, 506 |
| HpyCH4III | ACN|GT | 20, 87, 516 |
| HpyCH4IV | A|CGT | 395 |
| HpyCH4V | TG|CA | 319, 399, 562 |
| KasI | G|GCGCC | 306 |
| MboI | |GATC | 2, 133, 292, 476 |
| MspA1I | C[AC]G|C[GT]G | 118, 160 |
| MspI | C|CGG | 469, 521, 587, 609 |
| MwoI | GCNNNNN|NNGC | 90, 149, 167, 398, 534, 570 |
| NarI | GG|CGCC | 306 |
| NciI | CC|[CG]GG | 469, 521, 588, 609 |
| NcoI | C|CATGG | 15 |
| NlaIII | CATG| | 14, 265 |
| NlaIV | GGN|NCC | 306, 368, 666 |
| PspGI | |CC[AT]GG | 111, 344, 683 |
| PstI | CTGCA|G | 563 |
| PvuII | CAG|CTG | 118, 160 |
| Sau3AI | |GATC | 2, 133, 292, 476 |
| Sau96I | G|GNCC | 325 |
| SbfI | CCTGCA|GG | 564 |
| ScrFI | CC|NGG | 111, 344, 469, 521, 588, 609, 683 |
| SfcI | C|TPuPyAG | 89, 563 |
| SfoI | GGC|GCC | 306 |
| SmaI | CCC|GGG | 470 |
| StyI | C|C[AT][AT]GG | 15 |
| TfiI | G|A[AT]TC | 253 |
| TseI | G|C[AT]GC | 81, 143, 149, 170, 417, 528, 534 |
| Tsp45I | |GT[CG]AC | 426 |
| Tsp509I | |AATT | 195, 689 |
| TspRI | NNCA[CG]TGNN| | 79, 376, 517 |
| XcmI | CCANNNNN|NNNNTGG | 24 |
| XmaI | C|CCGGG | 470 |
| XmnI | GAANN|NNTTC | 196 |
Click here to view TAIR data
>AT1G08970.1 length:696
ATGGATCAAC AAGACCATGG ACAGTCTGGA GCTATGAACT ATGGCACAAA | 50 |
CCCATACCAA ACCAACCCGA TGAGCACCAC TGCTGCTACT GTAGCAGGAG | 100 |
GTGCGGCACA ACCAGGCCAG CTGGCGTTCC ACCAGATCCA TCAGCAGCAG | 150 |
CAGCAGCAAC AGCTGGCACA GCAGCTTCAA GCATTTTGGG AGAACCAATT | 200 |
CAAAGAGATT GAGAAGACTA CCGATTTCAA GAACCACAGC CTTCCCCTTG | 250 |
CGAGAATCAA GAAAATCATG AAAGCGGATG AAGATGTCCG TATGATCTCG | 300 |
GCTGAGGCGC CTGTCGTGTT TGCAAGGGCC TGTGAGATGT TCATCCTGGA | 350 |
GCTGACACTC AGGTCGTGGA ACCACACTGA GGAGAATAAG AGGCGGACGT | 400 |
TGCAGAAGAA CGATATTGCT GCTGCTGTGA CTAGAACCGA TATTTTTGAT | 450 |
TTCCTTGTGG ATATTGTTCC CCGGGAGGAT CTCCGAGATG AAGTCTTGGG | 500 |
AAGTATTCCG AGGGGCACTG TCCCGGAAGC TGCTGCTGCT GGTTACCCGT | 550 |
ATGGATACTT GCCTGCAGGA ACTGCTCCAA TAGGAAATCC GGGAATGGTT | 600 |
ATGGGTAATC CCGGTGGTGC GTATCCACCT AATCCTTATA TGGGTCAACC | 650 |
AATGTGGCAA CAACAGGCAC CTGACCAACC TGACCAGGAA AATTAG | 700 |
>AT1G08970.1 longest ORF length:231
MDQQDHGQSG AMNYGTNPYQ TNPMSTTAAT VAGGAAQPGQ LAFHQIHQQQ | 50 |
QQQQLAQQLQ AFWENQFKEI EKTTDFKNHS LPLARIKKIM KADEDVRMIS | 100 |
AEAPVVFARA CEMFILELTL RSWNHTEENK RRTLQKNDIA AAVTRTDIFD | 150 |
FLVDIVPRED LRDEVLGSIP RGTVPEAAAA GYPYGYLPAG TAPIGNPGMV | 200 |
MGNPGGAYPP NPYMGQPMWQ QQAPDQPDQE N | 250 |