Locus |
Common name |
Short description |
AT1G09250 |
bHLH149, AIF4 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT1G09250.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
152, 199 |
EcoRV
| GAT|ATC |
66 |
HindIII
| A|AGCTT |
117, 176 |
NcoI
| C|CATGG |
560 |
StyI
| C|C[AT][AT]GG |
560 |
Click here to view TAIR data
>AT1G09250.1 length:624
ATGGTGGAGT CTCTGTTCCC GAGCATCGAA AACACAGGTG AATCGTCTCG | 50 |
AAGAAAGAAG CCGAGGATAT CAGAGACGGC GGAGGCGGAG ATAGAGGCAC | 100 |
GACGTGTCAA CGAAGAAAGC TTGAAGAGAT GGAAAACGAA TCGTGTGCAA | 150 |
CAGATCTACG CTTGTAAGCT CGTCGAAGCT TTACGCCGAG TTCGTCAGAG | 200 |
ATCTTCCACC ACCAGCAACA ACGAGACCGA TAAACTCGTC TCCGGCGCGG | 250 |
CGAGGGAGAT ACGTGATACG GCGGATCGAG TTCTAGCTGC GTCCGCTCGT | 300 |
GGTACGACTC GGTGGAGCAG AGCGATTTTA GCGAGTCGCG TCCGAGCGAA | 350 |
GCTGAAGAAA CATAGAAAGG CGAAAAAGTC AACGGGAAAT TGTAAATCGA | 400 |
GAAAAGGTCT CACGGAGACG AATCGGATTA AGTTACCGGC GGTTGAGAGA | 450 |
AAACTGAAGA TTCTTGGCCG TTTGGTTCCT GGTTGCCGGA AAGTCTCTGT | 500 |
ACCGAATCTT TTAGATGAAG CGACCGATTA CATCGCAGCG TTAGAGATGC | 550 |
AGGTTCGAGC CATGGAGGCT CTCGCCGAAC TTTTAACCGC AGCCGCACCA | 600 |
CGGACGACGT TGACCGGAAC TTAA | 650 |
>AT1G09250.1 longest ORF length:207
MVESLFPSIE NTGESSRRKK PRISETAEAE IEARRVNEES LKRWKTNRVQ | 50 |
QIYACKLVEA LRRVRQRSST TSNNETDKLV SGAAREIRDT ADRVLAASAR | 100 |
GTTRWSRAIL ASRVRAKLKK HRKAKKSTGN CKSRKGLTET NRIKLPAVER | 150 |
KLKILGRLVP GCRKVSVPNL LDEATDYIAA LEMQVRAMEA LAELLTAAAP | 200 |
RTTLTGT | 250 |
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