fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G09250 bHLH149, AIF4 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT1G09250.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 152, 199
EcoRV GAT|ATC 66
HindIII A|AGCTT 117, 176
NcoI C|CATGG 560
StyI C|C[AT][AT]GG 560


Click here to view TAIR data

>AT1G09250.1 length:624
ATGGTGGAGT CTCTGTTCCC GAGCATCGAA AACACAGGTG AATCGTCTCG 
50
AAGAAAGAAG CCGAGGATAT CAGAGACGGC GGAGGCGGAG ATAGAGGCAC 
100
GACGTGTCAA CGAAGAAAGC TTGAAGAGAT GGAAAACGAA TCGTGTGCAA 
150
CAGATCTACG CTTGTAAGCT CGTCGAAGCT TTACGCCGAG TTCGTCAGAG 
200
ATCTTCCACC ACCAGCAACA ACGAGACCGA TAAACTCGTC TCCGGCGCGG 
250
CGAGGGAGAT ACGTGATACG GCGGATCGAG TTCTAGCTGC GTCCGCTCGT 
300
GGTACGACTC GGTGGAGCAG AGCGATTTTA GCGAGTCGCG TCCGAGCGAA 
350
GCTGAAGAAA CATAGAAAGG CGAAAAAGTC AACGGGAAAT TGTAAATCGA 
400
GAAAAGGTCT CACGGAGACG AATCGGATTA AGTTACCGGC GGTTGAGAGA 
450
AAACTGAAGA TTCTTGGCCG TTTGGTTCCT GGTTGCCGGA AAGTCTCTGT 
500
ACCGAATCTT TTAGATGAAG CGACCGATTA CATCGCAGCG TTAGAGATGC 
550
AGGTTCGAGC CATGGAGGCT CTCGCCGAAC TTTTAACCGC AGCCGCACCA 
600
CGGACGACGT TGACCGGAAC TTAA
650

>AT1G09250.1 longest ORF length:207
MVESLFPSIE NTGESSRRKK PRISETAEAE IEARRVNEES LKRWKTNRVQ 
50
QIYACKLVEA LRRVRQRSST TSNNETDKLV SGAAREIRDT ADRVLAASAR 
100
GTTRWSRAIL ASRVRAKLKK HRKAKKSTGN CKSRKGLTET NRIKLPAVER 
150
KLKILGRLVP GCRKVSVPNL LDEATDYIAA LEMQVRAMEA LAELLTAAAP 
200
RTTLTGT
250