fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G09770 ATCDC5, AtMYBCDC5 ARABIDOPSIS THALIANA MYB DOMAIN CELL DIVISION CYCLE 5, ARABIDOPSIS THALIANA CELL DIVISION CYCLE 5, cell division cycle 5 (.1)

>AT1G09770.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NotI, PacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 1623
HindIII A|AGCTT 205, 2522
NcoI C|CATGG 2516
NheI G|CTAGC 2481
PstI CTGCA|G 2353
PvuII CAG|CTG 575, 1640, 1679
SacI GAGCT|C 1885, 2035
StyI C|C[AT][AT]GG 1030, 1607, 2516


Click here to view TAIR data

>AT1G09770.1 length:2535
ATGAGGATTA TGATTAAGGG AGGTGTTTGG AAGAACACCG AAGATGAGAT 
50
TCTCAAAGCC GCCGTGATGA AGTATGGTAA GAACCAATGG GCTCGGATCT 
100
CGTCTCTTCT CGTTCGTAAG TCTGCTAAAC AGTGTAAAGC TCGCTGGTAC 
150
GAGTGGCTCG ATCCATCTAT CAAAAAGACT GAATGGACCA GAGAAGAAGA 
200
TGAGAAGCTT CTACATCTTG CTAAACTTCT GCCTACTCAA TGGAGAACTA 
250
TTGCTCCTAT TGTGGGTCGT ACACCATCTC AATGTCTTGA GAGGTATGAG 
300
AAGCTCCTTG ATGCAGCATG CACTAAGGAT GAAAATTATG ATGCAGCGGA 
350
TGATCCACGA AAATTACGTC CTGGTGAGAT TGATCCGAAC CCAGAAGCAA 
400
AGCCTGCTCG TCCTGATCCG GTAGACATGG ACGAAGATGA GAAAGAAATG 
450
CTTTCTGAAG CAAGAGCTAG ATTGGCTAAC ACGAGGGGAA AGAAGGCTAA 
500
AAGAAAAGCT AGAGAAAAAC AACTTGAGGA AGCTAGAAGG CTTGCTTCTC 
550
TGCAAAAAAG AAGAGAACTA AAAGCAGCTG GGATTGATGG AAGGCATAGG 
600
AAAAGAAAGA GAAAGGGAAT CGACTATAAT GCAGAAATTC CTTTTGAAAA 
650
GAGGGCACCT GCGGGATTTT ATGATACTGC GGATGAAGAT CGTCCTGCTG 
700
ATCAAGTAAA ATTTCCAACT ACCATTGAAG AACTTGAAGG AAAAAGAAGA 
750
GCTGATGTAG AAGCACATTT ACGCAAACAA GATGTTGCAA GGAATAAAAT 
800
TGCTCAGAGA CAGGATGCTC CAGCAGCTAT ATTGCAAGCA AACAAGCTGA 
850
ATGATCCGGA AGTTGTTAGG AAGAGGTCAA AGCTGATGTT ACCACCACCG 
900
CAGATTTCAG ACCACGAGCT AGAAGAAATT GCTAAGATGG GCTATGCCAG 
950
TGACCTTCTT GCCGAGAATG AGGAGCTAAC AGAAGGCAGT GCTGCTACTC 
1000
GTGCACTTTT GGCAAATTAC TCACAAACAC CAAGGCAAGG AATGACACCC 
1050
ATGAGGACAC CTCAAAGAAC TCCTGCTGGT AAAGGTGATG CTATTATGAT 
1100
GGAAGCAGAA AACCTGGCCA GATTAAGAGA CTCTCAGACA CCTTTGCTAG 
1150
GAGGAGAAAA TCCTGAGTTG CACCCTTCTG ACTTCACTGG GGTCACTCCG 
1200
AGAAAGAAGG AGATTCAAAC GCCTAATCCA ATGTTGACCC CTTCAATGAC 
1250
TCCTGGTGGT GCTGGTCTTA CTCCAAGAAT TGGCTTGACG CCATCAAGGG 
1300
ATGGGTCTTC TTTTTCTATG ACACCCAAAG GGACTCCCTT CAGGGATGAA 
1350
CTTCACATTA ACGAAGACAT GGACATGCAC GAAAGTGCAA AACTTGAGAG 
1400
GCAGAGACGA GAGGAAGCTA GAAGGAGTTT ACGCTCTGGT TTGACTGGGC 
1450
TTCCTCAGCC AAAGAACGAG TACCAAATAG TTGCACAACC TCCTCCTGAG 
1500
GAAAGTGAAG AGCCAGAAGA GAAAATTGAG GAAGACATGT CAGACAGGAT 
1550
AGCGAGGGAA AAGGCGGAGG AAGAAGCAAG ACAACAGGCA TTGCTTAAGA 
1600
AGAGATCCAA GGTCTTGCAG AGAGATCTTC CTAGACCCCC AGCTGCTTCA 
1650
TTGGCAGTAA TTAGGAACTC GTTGCTTTCA GCTGATGGAG ACAAAAGTTC 
1700
TGTTGTTCCT CCTACTCCGA TTGAGGTTGC AGATAAAATG GTAAGAGAGG 
1750
AGCTTCTACA GTTGCTGGAG CATGATAATG CAAAGTATCC GCTTGATGAC 
1800
AAAGCTGAGA AGAAGAAAGG AGCCAAGAAC CGTACCAACC GTTCTGCTTC 
1850
TCAAGTTCTT GCAATTGACG ATTTTGATGA AAATGAGCTC CAAGAGGCTG 
1900
ACAAAATGAT AAAGGAGGAG GGGAAGTTTC TGTGTGTGTC AATGGGACAT 
1950
GAGAACAAGA CACTTGATGA TTTTGTAGAA GCTCACAACA CATGCGTGAA 
2000
TGATCTCATG TATTTCCCCA CTCGAAGCGC TTACGAGCTC TCAAGTGTTG 
2050
CTGGGAACGC GGACAAAGTT GCAGCTTTTC AGGAGGAGAT GGAGAATGTG 
2100
AGAAAAAAGA TGGAGGAGGA TGAGAAGAAG GCAGAACACA TGAAGGCCAA 
2150
GTACAAAACT TATACAAAGG GTCATGAGAG GAGGGCAGAG ACCGTGTGGA 
2200
CCCAAATAGA GGCGACATTG AAGCAGGCTG AGATTGGTGG AACAGAAGTA 
2250
GAGTGCTTTA AAGCATTGAA GAGGCAAGAA GAGATGGCTG CATCTTTTAG 
2300
GAAAAAGAAT TTGCAAGAGG AAGTGATAAA GCAAAAGGAA ACAGAGAGTA 
2350
AACTGCAGAC TCGCTATGGG AATATGTTGG CAATGGTTGA AAAAGCAGAG 
2400
GAGATAATGG TCGGTTTCCG AGCACAGGCA TTGAAGAAAC AAGAGGATGT 
2450
TGAAGATTCT CACAAACTGA AAGAAGCTAA GCTAGCCACT GGAGAGGAAG 
2500
AGGACATAGC CATAGCCATG GAAGCTTCTG CATAA
2550

>AT1G09770.1 longest ORF length:844
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY 
50
EWLDPSIKKT EWTREEDEKL LHLAKLLPTQ WRTIAPIVGR TPSQCLERYE 
100
KLLDAACTKD ENYDAADDPR KLRPGEIDPN PEAKPARPDP VDMDEDEKEM 
150
LSEARARLAN TRGKKAKRKA REKQLEEARR LASLQKRREL KAAGIDGRHR 
200
KRKRKGIDYN AEIPFEKRAP AGFYDTADED RPADQVKFPT TIEELEGKRR 
250
ADVEAHLRKQ DVARNKIAQR QDAPAAILQA NKLNDPEVVR KRSKLMLPPP 
300
QISDHELEEI AKMGYASDLL AENEELTEGS AATRALLANY SQTPRQGMTP 
350
MRTPQRTPAG KGDAIMMEAE NLARLRDSQT PLLGGENPEL HPSDFTGVTP 
400
RKKEIQTPNP MLTPSMTPGG AGLTPRIGLT PSRDGSSFSM TPKGTPFRDE 
450
LHINEDMDMH ESAKLERQRR EEARRSLRSG LTGLPQPKNE YQIVAQPPPE 
500
ESEEPEEKIE EDMSDRIARE KAEEEARQQA LLKKRSKVLQ RDLPRPPAAS 
550
LAVIRNSLLS ADGDKSSVVP PTPIEVADKM VREELLQLLE HDNAKYPLDD 
600
KAEKKKGAKN RTNRSASQVL AIDDFDENEL QEADKMIKEE GKFLCVSMGH 
650
ENKTLDDFVE AHNTCVNDLM YFPTRSAYEL SSVAGNADKV AAFQEEMENV 
700
RKKMEEDEKK AEHMKAKYKT YTKGHERRAE TVWTQIEATL KQAEIGGTEV 
750
ECFKALKRQE EMAASFRKKN LQEEVIKQKE TESKLQTRYG NMLAMVEKAE 
800
EIMVGFRAQA LKKQEDVEDS HKLKEAKLAT GEEEDIAIAM EASA
850