fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G10120 bHLH074, CIB4 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT1G10120.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 138
BglII A|GATCT 870
NcoI C|CATGG 194
NdeI CA|TATG 613
PstI CTGCA|G 128, 877
SacI GAGCT|C 573, 1093
StyI C|C[AT][AT]GG 194
XbaI T|CTAGA 70


Click here to view TAIR data

>AT1G10120.1 length:1101
ATGGGTGGTG AGAGTAATGA AGGAGGAGAG ATGGGCTTTA AGCATGGAGA 
50
TGATGAGAGT GGTGGGATCT CTAGAGTTGG AATTACATCA ATGCCCTTGT 
100
ATGCAAAGGC AGATCCTTTC TTCTCTTCTG CAGATTGGGA TCCAGTTGTC 
150
AATGCTGCTG CTGCTGGCTT CTCCAGCTCT CATTACCATC CTTCCATGGC 
200
GATGGATAAT CCAGGGATGA GTTGCTTCTC TCATTACCAA CCCGGTTCTG 
250
TTTCCGGTTT TGCAGCAGAC ATGCCTGCTA GTCTTCTTCC GTTTGGTGAT 
300
TGTGGTGGTG GTCAAATTGG TCATTTTCTT GGTTCAGACA AGAAAGGGGA 
350
AAGATTGATC AGAGCTGGAG AATCATCTCA TGAGGATCAT CATCAGGTTT 
400
CAGATGATGC TGTTCTTGGT GCTTCCCCAG TTGGGAAAAG AAGGCTACCT 
450
GAAGCCGAAT CACAATGGAA CAAGAAAGCT GTGGAGGAAT TTCAAGAAGA 
500
CCCTCAAAGG GGAAATGATC AGAGCCAGAA GAAGCATAAA AATGATCAGA 
550
GTAAAGAGAC GGTGAACAAG GAGAGCTCAC AAAGTGAAGA AGCACCGAAA 
600
GAAAACTACA TTCATATGAG GGCAAGAAGA GGTCAAGCCA CTAATAGTCA 
650
CAGTCTTGCA GAGCGGGTTA GAAGAGAAAA GATCAGTGAA AGGATGAGAT 
700
TGCTTCAAGA ACTTGTTCCC GGATGCAACA AGATCACCGG AAAAGCGGTT 
750
ATGCTCGATG AAATAATCAA CTATGTTCAG TCATTGCAAC AGCAAGTTGA 
800
GTTTTTGTCT ATGAAACTTG CGACGGTGAA TCCAGAGATC AATATTGATA 
850
TAGACAGGAT TCTCGCCAAA GATCTTCTGC AGTCAAGAGA CAGAAACACT 
900
CCTACACTCG GGCTGAATCC TTTTGCCGGT TTTCAAGGGA ACATACCAAA 
950
CCTTTCTGCC ACCACAAATC CACAATACAA CCCACTACCT CAGACAACAC 
1000
TAGAGAGTGA ACTACAAAAC CTTTACCAGA TGGGATTCGT CTCAAATCCA 
1050
TCGACTATGT CCAGTTTCTC ACCTAATGGT CGATTGAAAC CTGAGCTCTA 
1100
G
1150

>AT1G10120.1 longest ORF length:366
MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV 
50
NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD 
100
CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP 
150
EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK 
200
ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV 
250
MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT 
300
PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP 
350
STMSSFSPNG RLKPEL
400