fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G10240 FRS11 FAR1-related sequence 11 (.1)

>AT1G10240.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 1514
NdeI CA|TATG 809, 1092
NheI G|CTAGC 1401
PstI CTGCA|G 1695, 1731, 1879
SacI GAGCT|C 457
StyI C|C[AT][AT]GG 1514


Click here to view TAIR data

>AT1G10240.1 length:2043
ATGTCGGATG ATCCTGGACA GATGTTGCTC ATCTATGATG ATCCTTCAGA 
50
TCAGCGATCC TTGTCTTTAG ATGATGCTAG TAGTACTGAG GAATCTCCAG 
100
ACGATAACAA TCTCTCTTTA GAAGCAGTTC ACAATGCCAT TCCCTATCTC 
150
GGACAAATTT TCCTTACACA TGATACTGCT TACGAGTTCT ATAGTACATT 
200
TGCAAAGCGT TGCGGGTTCT CCATACGCCG TCACAGGACA GAAGGAAAAG 
250
ACGGAGTTGG CAAAGGACTT ACTAGGCGCT ACTTTGTTTG TCACCGTGCT 
300
GGTAACACAC CTATCAAAAC TCTAAGCGAA GGAAAACCAC AGAGAAACAG 
350
AAGGTCTTCT CGATGTGGAT GTCAAGCATA CTTAAGGATT AGTAAACTTA 
400
CTGAGTTAGG TTCAACGGAA TGGCGTGTTA CTGGTTTTGC TAATCACCAC 
450
AATCATGAGC TCTTAGAACC AAACCAAGTT CGTTTTCTTC CTGCGTACAG 
500
GTCCATATCA GATGCAGATA AAAGTCGGAT TTTGATGTTT TCCAAGACAG 
550
GAATTTCAGT TCAGCAGATG ATGAGGCTCT TGGAGCTTGA GAAGTGTGTC 
600
GAGCCAGGAT TTTTACCATT CACCGAAAAG GATGTCAGGA ATTTGCTTCA 
650
GTCATTCAAG AAACTCGATC CTGAGGATGA GAACATTGAT TTCCTGAGGA 
700
TGTGCCAAAG CATAAAGGAG AAAGACCCTA ACTTTAAGTT CGAGTTTACT 
750
TTGGATGCAA ATGATAAGTT AGAAAATATT GCCTGGTCGT ATGCTTCTTC 
800
CATTCAGTCA TATGAACTCT TTGGAGATGC TGTTGTTTTC GATACAACAC 
850
ATCGCTTAAG TGCTGTTGAG ATGCCACTTG GAATATGGGT TGGAGTTAAT 
900
AACTATGGTG TCCCTTGCTT CTTCGGTTGT GTGCTTCTAC GGGATGAAAA 
950
TTTGAGATCG TGGTCATGGG CACTACAGGC ATTCACAGGG TTCATGAATG 
1000
GGAAGGCACC TCAAACGATA TTAACAGACC ATAATATGTG TCTCAAAGAA 
1050
GCCATAGCTG GAGAGATGCC AGCCACTAAG CATGCACTCT GCATATGGAT 
1100
GGTTGTTGGA AAGTTTCCAT CCTGGTTTAA TGCCGGTCTT GGGGAGCGGT 
1150
ACAACGACTG GAAAGCTGAA TTTTATCGCC TCTACCATCT GGAATCCGTT 
1200
GAGGAGTTTG AGTTGGGTTG GAGAGACATG GTGAACTCTT TTGGACTGCA 
1250
CACAAACAGA CACATCAACA ACTTGTATGC CTCACGTTCC TTGTGGTCTT 
1300
TACCATACCT GAGAAGCCAT TTTCTAGCTG GAATGACTTT GACTGGCCGA 
1350
TCCAAAGCCA TTAACGCCTT TATTCAGAGG TTCTTGAGCG CACAAACCCG 
1400
GCTAGCTCAC TTTGTAGAAC AAGTGGCTGT TGTTGTGGAT TTTAAAGACC 
1450
AAGCTACAGA ACAGCAAACA ATGCAGCAGA ATCTCCAAAA CATCAGCCTA 
1500
AAAACTGGCG CCCCCATGGA ATCTCACGCA GCCTCGGTGC TCACTCCTTT 
1550
TGCATTCTCC AAGCTCCAAG AACAGCTTGT GCTTGCTGCT CACTACGCAT 
1600
CGTTCCAGAT GGATGAGGGG TATCTCGTGA GGCACCACAC AAAACTCGAT 
1650
GGAGGAAGAA AAGTGTATTG GGTTCCTCAA GAAGGCATCA TAAGCTGCAG 
1700
TTGCCAACTG TTTGAGTTCT CTGGGTTTCT CTGCAGGCAC GCACTCCGTG 
1750
TTCTCTCCAC AGGAAACTGT TTTCAGGTCC CTGATAGGTA TCTTCCACTT 
1800
AGGTGGCGCA GGATCAGCAC GTCGTTTAGC AAGACGTTCA GAAGTAACGC 
1850
TGAGGATCAT GGAGAGAGAG TTCAGCTTCT GCAGAATCTG GTTTCGACTC 
1900
TGGTCTCAGA ATCGGCTAAA TCGAAGGAGA GGCTAGATAT TGCAACTGAG 
1950
CAAACCTCCA TCCTCTTATC CCGTATCAGA GAGCAGCCTG TCTCCTCACT 
2000
TGCTATCAGA GACATTTCTT CTTCTGTGCA GAGGAATTTT TGA
2050

>AT1G10240.1 longest ORF length:680
MSDDPGQMLL IYDDPSDQRS LSLDDASSTE ESPDDNNLSL EAVHNAIPYL 
50
GQIFLTHDTA YEFYSTFAKR CGFSIRRHRT EGKDGVGKGL TRRYFVCHRA 
100
GNTPIKTLSE GKPQRNRRSS RCGCQAYLRI SKLTELGSTE WRVTGFANHH 
150
NHELLEPNQV RFLPAYRSIS DADKSRILMF SKTGISVQQM MRLLELEKCV 
200
EPGFLPFTEK DVRNLLQSFK KLDPEDENID FLRMCQSIKE KDPNFKFEFT 
250
LDANDKLENI AWSYASSIQS YELFGDAVVF DTTHRLSAVE MPLGIWVGVN 
300
NYGVPCFFGC VLLRDENLRS WSWALQAFTG FMNGKAPQTI LTDHNMCLKE 
350
AIAGEMPATK HALCIWMVVG KFPSWFNAGL GERYNDWKAE FYRLYHLESV 
400
EEFELGWRDM VNSFGLHTNR HINNLYASRS LWSLPYLRSH FLAGMTLTGR 
450
SKAINAFIQR FLSAQTRLAH FVEQVAVVVD FKDQATEQQT MQQNLQNISL 
500
KTGAPMESHA ASVLTPFAFS KLQEQLVLAA HYASFQMDEG YLVRHHTKLD 
550
GGRKVYWVPQ EGIISCSCQL FEFSGFLCRH ALRVLSTGNC FQVPDRYLPL 
600
RWRRISTSFS KTFRSNAEDH GERVQLLQNL VSTLVSESAK SKERLDIATE 
650
QTSILLSRIR EQPVSSLAIR DISSSVQRNF 
700