fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G10320 Zinc finger C-x8-C-x5-C-x3-H type family protein (.1)

>AT1G10320.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, HpaI, KpnI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 1356, 1393
EcoRI G|AATTC 2139
EcoRV GAT|ATC 2033
HindIII A|AGCTT 397, 635, 1495
NcoI C|CATGG 1665
NdeI CA|TATG 1134
PvuII CAG|CTG 1841
SpeI A|CTAGT 2020
StyI C|C[AT][AT]GG 1665
XbaI T|CTAGA 381, 1396


Click here to view TAIR data

>AT1G10320.1 length:2274
ATGGAGCAAG CAAACGAAAA GGAAGAAGAA GAGCGACACG AAGAAGCGGC 
50
GGGAGAGAAG GAAAGTTTTG AAGAGAGTAA AGAGAAAGCG GCGGAGATGA 
100
GTCGTAAGGA GAAGCGAAAA GCGATGAAGA AATTGAAGAG GAAGCAAGTG 
150
AGGAAGGAGA TTGCGGCGAA GGAGAGGGAG GAAGCGAAGG CTAAGTTAAA 
200
CGATCCGGCG GAACAGGAGA GATTGAAGGC GATTGAGGAA GAGGATGCGC 
250
GGAGGAGAGA AAAGGAGTTG AAGGACTTTG AGGAGAGTGA AAGAGCTTGG 
300
AGAGAAGCTA TGGAGATCAA GAGGAAGAAA GAGGAGGAAG AGGAAGCGAA 
350
GCGGGAAGAG GAAGAGAGGC GTTGGAAGGA TCTAGAAGAG TTGAGAAAGC 
400
TTGAGGCTAG TGGGAATGAT GAGTGTGGTG AGGATGAGGA TGGTGAATAT 
450
GAATATATCG AAGAAGGACC TCCAGAAATT ATATTCCAGG GAAATGAGAT 
500
CATTCTCAAA AAGAACAAAG TGAGAGTTCC AAAGAAATCG GTTGTTCAGG 
550
TCGATGGACA CGAGAGTTCC AATGCGGAGT TTGTTTTGCA GATTTCTGAC 
600
AGGCCTACTT CAAATCCTCT ACCTCCGGGA AGTGAAGCTT CAGCCAATTA 
650
TCAGAATGTT AGTTCTGCGC AACAGATATT GGAGAGTGTT GCACAAGAAG 
700
TACCCAACTT TGGAACTGAG CAGGATAAAG CTCATTGTCC TTTCCATTTG 
750
AAAACTGGAG CTTGTCGGTT TGGCCAGCGT TGCAGCAGAG TTCATTTCTA 
800
CCCCAATAAA TCGTGCACTC TACTTATGAA GAACATGTAT AATGGTCCTG 
850
GTATTACTTG GGAACAGGAT GAGGGGCTTG AGTATACAGA TGAGGAGGCT 
900
GAACTCTGTT ATGAAGAATT TTATGAAGAT GTTCATACAG AGTTCCTAAA 
950
GTATGGAGAA CTTGTTAATT TCAAGGTGTG TAGAAATGGC TCATTCCATT 
1000
TGAAGGGCAA TGTATATGTC CACTACAGAT CACTAGAATC AGCTATTCTT 
1050
GCTTACCAGT CCATTAATGG TCGATACTTT GCGGGTAAAC AGGTGAATTG 
1100
CGAGTTTGTC AACATCTCAA GATGGAAAGT TGCCATATGT GGGGAGTACA 
1150
TGAAGTCCAG GCTTAAAACT TGTTCTCGTG GATCTGCCTG CAATTTTATC 
1200
CATTGTTTCC GAAATCCTGG TGGAGACTAT GAATGGGCTG ACCATGACAG 
1250
ACCACCTCCA AGATTCTGGA TTCACAAAAT GACCTCTTTA TTTGGTTATT 
1300
CAGATGAAAA GCACATGGAA CATGAATCTT CAGGGTCGTT AAATGATTCA 
1350
ATATCAGATC TATCAACAGA TTCACACAGG CAACCTTCAA GAAGATCTAG 
1400
ATCGAGGGAC CATGATCATG CTAATGTTGG ATCTACGCCT TCTTATAGGA 
1450
GCCGTAAATA TCATGGTGAT ACTCAGGACA GCACTCGTGA AGACAAGCTT 
1500
CGCAGGCATG CCGAGAACTG TCATGATGGT GATGACAGTC CGAGCAGAGA 
1550
TGGTAGTTTA GAGAGGGAGA TGTATAAAGA GCGACGGTAT GCTAAGGACA 
1600
CATTGCATCG TGATAGCAGA TGGTCTGAAC ACTCTCCTGG ACATCGGGTG 
1650
GGAAGGAAGA GAATCCATGG GAGGTATTCT GATGATGATT CTGCTGATGG 
1700
AGATGACTAT GGTAGGAGAG GGACGGGTCA CAAACGAAAA CCCAGAAGAG 
1750
GGACAGATTC AGGAGTACAA GAACAGATGG ACAATGAAAA GGACAGAAAA 
1800
ACCCACAGGA GTTCAAGAAA ACACAGCAGG GAAGGGTCAT CAGCTGATAA 
1850
AGAGGAGGGT CATGAACATG ATAGGGTTCA TACAGTTTCT GACAAGTCGC 
1900
ATAGAGAAAG ATCGAAGCAT CGACATGAAA GAAGTAGCTC AAGATATTCA 
1950
CACGAGGAAG ATTCAACTGA GAGTAGACAT CATCAGCACA AAGAATCAGA 
2000
CAAGAAGAGA AGTGTAGAGA CTAGTCCCGT AGGATATCAG TCAGATAAAG 
2050
ATAGGGACAG AAGCAAACAG AGACAGAGAT ACAAGAGCGA TGATCCAGAG 
2100
TCTGATCAAA GCAGGAAAGG AAAACGACAA AGTGAAGAGA ATTCAGATAG 
2150
AGAAACACAC AAAGAGAGAC GTCATCGCCA TAGAAAAAGA AGACGGACAC 
2200
AAAACTCAGA CGACCAGAAT CCTAAGGAAT CAGAGGAAGT GGAAGAAGAG 
2250
ATTGAGCGTT GGAGACCAGT GTGA
2300

>AT1G10320.1 longest ORF length:757
MEQANEKEEE ERHEEAAGEK ESFEESKEKA AEMSRKEKRK AMKKLKRKQV 
50
RKEIAAKERE EAKAKLNDPA EQERLKAIEE EDARRREKEL KDFEESERAW 
100
REAMEIKRKK EEEEEAKREE EERRWKDLEE LRKLEASGND ECGEDEDGEY 
150
EYIEEGPPEI IFQGNEIILK KNKVRVPKKS VVQVDGHESS NAEFVLQISD 
200
RPTSNPLPPG SEASANYQNV SSAQQILESV AQEVPNFGTE QDKAHCPFHL 
250
KTGACRFGQR CSRVHFYPNK SCTLLMKNMY NGPGITWEQD EGLEYTDEEA 
300
ELCYEEFYED VHTEFLKYGE LVNFKVCRNG SFHLKGNVYV HYRSLESAIL 
350
AYQSINGRYF AGKQVNCEFV NISRWKVAIC GEYMKSRLKT CSRGSACNFI 
400
HCFRNPGGDY EWADHDRPPP RFWIHKMTSL FGYSDEKHME HESSGSLNDS 
450
ISDLSTDSHR QPSRRSRSRD HDHANVGSTP SYRSRKYHGD TQDSTREDKL 
500
RRHAENCHDG DDSPSRDGSL EREMYKERRY AKDTLHRDSR WSEHSPGHRV 
550
GRKRIHGRYS DDDSADGDDY GRRGTGHKRK PRRGTDSGVQ EQMDNEKDRK 
600
THRSSRKHSR EGSSADKEEG HEHDRVHTVS DKSHRERSKH RHERSSSRYS 
650
HEEDSTESRH HQHKESDKKR SVETSPVGYQ SDKDRDRSKQ RQRYKSDDPE 
700
SDQSRKGKRQ SEENSDRETH KERRHRHRKR RRTQNSDDQN PKESEEVEEE 
750
IERWRPV
800