fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G10480 ZFP5 zinc finger protein 5 (.1)

>AT1G10480.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 483, 555
HpaI GTT|AAC 159
SacI GAGCT|C 135


Click here to view TAIR data

>AT1G10480.1 length:636
ATGTCTATAA ATCCGACAAT GTCTCGTACT GGCGAAAGTT CTTCAGGTTC 
50
GTCCTCCGAC AAGACGATAA AGCTATTCGG CTTCGAACTC ATCAGCGGCA 
100
GTCGTACGCC GGAAATCACG ACGGCGGAAA GCGTGAGCTC GTCCACAAAC 
150
ACGACGTCGT TAACAGTGAT GAAAAGACAC GAGTGCCAAT ACTGCGGTAA 
200
AGAGTTTGCA AATTCTCAAG CCTTAGGAGG TCACCAAAAC GCTCACAAGA 
250
AGGAGAGGTT GAAGAAGAAG AGGCTTCAGC TTCAAGCTCG GCGAGCCAGC 
300
ATCGGCTATT ATCTCACCAA CCACCAACAA CCCATAACGA CGTCATTTCA 
350
GAGACAATAC AAAACGCCGT CGTATTGTGC ATTCTCCTCC ATGCACGTGA 
400
ATAATGATCA GATGGGTGTG TACAACGAAG ATTGGTCGTC GAGGTCGTCG 
450
CAGATTAACT TCGGTAATAA TGACACGTGC CAAGATCTTA ATGAACAAAG 
500
CGGTGAGATG GGTAAGCTGT ACGGTGTTCG ACCGAACATG ATTCAGTTCC 
550
AGAGAGATCT GAGTTCTCGT TCTGATCAGA TGAGAAGTAT TAACTCGCTG 
600
GATCTTCATC TAGGTTTTGC CGGAGATGCG GCATAA
650

>AT1G10480.1 longest ORF length:211
MSINPTMSRT GESSSGSSSD KTIKLFGFEL ISGSRTPEIT TAESVSSSTN 
50
TTSLTVMKRH ECQYCGKEFA NSQALGGHQN AHKKERLKKK RLQLQARRAS 
100
IGYYLTNHQQ PITTSFQRQY KTPSYCAFSS MHVNNDQMGV YNEDWSSRSS 
150
QINFGNNDTC QDLNEQSGEM GKLYGVRPNM IQFQRDLSSR SDQMRSINSL 
200
DLHLGFAGDA A
250