fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G11490 zinc finger (C2H2 type) family protein (.1)

>AT1G11490.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 411
HindIII A|AGCTT 640, 1058
PstI CTGCA|G 198
SacI GAGCT|C 219, 616


Click here to view TAIR data

>AT1G11490.1 length:1098
ATGCGTGGGG TTTGGCTTTA TCTCAAGAAG TCTCTTAGCT GCTGCAAGGC 
50
ACAGAAGTCA ACTGTAGCTT GTGATCCAGA CAAGATCCAA ATTCAGAAGA 
100
AGGAGAATCC ATCTGGATGC TCAAGAAGAT CAATGTCGAA TCTGAGAGAT 
150
GTCTTTGTAA CTAATGGAGA TGAAGGAGCT ATGCAGAATG TAAGCTGCTG 
200
CAGCTCACGG TCTCTTGAGA GCTCCAGGTT TGTAAACACA GTGAAATTTG 
250
AGGAGAATGC AGGTTATTCA GACAGATTCA AAGGTTTGCT TAGCGGAGCA 
300
TCTTCTTCTG ATTTACTTCC CGGTCGTTGT TCAGAGAGAT TTGATGTTGT 
350
TGGCTCTGAC ATCTGCGGTT TCGGAGTTCT TGCTTGTCAA AAATGTCATG 
400
AGAGAGTCAG AGATCTTGAC GCGTTTGAAG CACATTACCT CTCTAACCAC 
450
TCTGTCGTTA GACTCTTAGC AGGAGATTTC TCAAGAACAA CTGTGGAACT 
500
AATCTGCAAC ACAGGCTATT CTCACAAGCT AGGCAAAATG AAAGGGAACA 
550
ACATTTCAGC GATCTTTAAA ATCCAGAACT TGCAGAGAGT TGTTGCAGAC 
600
TTTGAAGATT ACAGAGAGCT CGTGAAAATA AGAGCAAACA AGCTTTCAAA 
650
GAAGCACTCT CGTTGTATGG CTGATGGCAA CGAGTTTCTT GGGTTCCACG 
700
GTACAACTCT TTCTTGCACT CTCGGTTTCA GTAACAGCTC TTCAAACCTC 
750
TGTTTCTCGG ATCACTGTGA AGTTTGTCAT ATTCTAAGAC ATGGTTTCAG 
800
TCCTAAAACA AGACCAGATG GGATAAAAGG AGTTCTCACA GCATCAACTA 
850
GCTCTACAGC TCTTGAATCT ATCGAAACCG ATCAAGGAAG AAATAGAGGT 
900
TCATTGATAG CTGTTGTGCT ATGTAGAGTG ATTGCAGGGA GGGTTCATAA 
950
ACCTATGCAG ACGTTTGAAA ATTCTTTAGG GTTTTCTGAG TTTGATTCAC 
1000
TAGCTTTGAA AGTTGGACAA AATTCAAGAA TTGAAGAGCT TTACCTGTTG 
1050
AGTACAAAAG CTTTGTTACC TTGCTTTGTG ATAATCTTCA AGCCATGA
1100

>AT1G11490.1 longest ORF length:365
MRGVWLYLKK SLSCCKAQKS TVACDPDKIQ IQKKENPSGC SRRSMSNLRD 
50
VFVTNGDEGA MQNVSCCSSR SLESSRFVNT VKFEENAGYS DRFKGLLSGA 
100
SSSDLLPGRC SERFDVVGSD ICGFGVLACQ KCHERVRDLD AFEAHYLSNH 
150
SVVRLLAGDF SRTTVELICN TGYSHKLGKM KGNNISAIFK IQNLQRVVAD 
200
FEDYRELVKI RANKLSKKHS RCMADGNEFL GFHGTTLSCT LGFSNSSSNL 
250
CFSDHCEVCH ILRHGFSPKT RPDGIKGVLT ASTSSTALES IETDQGRNRG 
300
SLIAVVLCRV IAGRVHKPMQ TFENSLGFSE FDSLALKVGQ NSRIEELYLL 
350
STKALLPCFV IIFKP
400