Locus |
Common name |
Short description |
AT1G12630 |
|
Integrase-type DNA-binding superfamily protein (.1) |
>AT1G12630.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
45, 223 |
EcoRI
| G|AATTC |
546 |
NcoI
| C|CATGG |
143 |
StyI
| C|C[AT][AT]GG |
143 |
Click here to view TAIR data
>AT1G12630.1 length:579
ATGAATAGTT CAATGGCTTC TGCCGGCTTA GGTAGCCGGA GAAAGGATCC | 50 |
GGTGTACAGA GGAATCCGGT GCCGAAGTGG GAAATGGGTC TCCGAGATTC | 100 |
GTGAGCCGAG GAAAACCACG AGAATCTGGC TTGGAACTTA CCCCATGGCA | 150 |
GAGATGGCAG CAGCCGCCTA TGATGTGGCT GCTATGGCTC TTAAAGGAAG | 200 |
AGAAGCTGTC TTGAACTTCC CTGGATCCGT CGGGTCATAC CCGGTTCCTG | 250 |
AATCAACATC CGCAGCAGAT ATACGAGCCG CTGCGGCAGC CGCAGCAGCA | 300 |
ATGAAGGGAT GTGAGGAAGG GGAGGAGGAG AAAAAGGCAA AGGAGAAGAA | 350 |
GAGTAGTAGT TCGAAGTCGA GAGCGCGTGA GTGCCACGTA GATAATGATG | 400 |
TTGGATCTTC GTCGTGGTGT GGGACAGAGT TCATGGACGA AGAAGAAGTC | 450 |
TTGAATATGC CTAATCTGCT GGCTAATATG GCAGAAGGGA TGATGGTTGC | 500 |
GCCGCCGTCG TGGATGGGTT CTCGGCCGTC GGATGACTCT CCGGAGAATT | 550 |
CAAATGATGA GGACTTGTGG GGCTATTGA | 600 |
>AT1G12630.1 longest ORF length:192
MNSSMASAGL GSRRKDPVYR GIRCRSGKWV SEIREPRKTT RIWLGTYPMA | 50 |
EMAAAAYDVA AMALKGREAV LNFPGSVGSY PVPESTSAAD IRAAAAAAAA | 100 |
MKGCEEGEEE KKAKEKKSSS SKSRARECHV DNDVGSSSWC GTEFMDEEEV | 150 |
LNMPNLLANM AEGMMVAPPS WMGSRPSDDS PENSNDEDLW GY | 200 |
|