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| Locus | Common name | Short description |
| AT1G12860 | SCRM2, ICE2, bHLH033 | SCREAM 2, INDUCER OF CBF EXPRESSION 2, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT1G12860.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, XbaI
| Name | Recognition sequence | Cut positions |
| EcoRV | GAT|ATC | 1855 |
| HindIII | A|AGCTT | 1454, 1966, 2127 |
| HpaI | GTT|AAC | 595, 2139 |
| NcoI | C|CATGG | 1548 |
| SacI | GAGCT|C | 1758 |
| SpeI | A|CTAGT | 1837 |
| StyI | C|C[AT][AT]GG | 1548 |
| XhoI | C|TCGAG | 1761 |
Click here to view TAIR data
>AT1G12860.1 length:2487
ATGGAGAGTA GAGAGGATTC ATTCATATCA AAAGAGAAGA AATCAACTAT | 50 |
GAAAAAAGAA AAACAAGCGA TTGCATCACA AAGAAATAGA AGAAGAGTAA | 100 |
TTAAAAATAG AGGAAACGGG AAGCGATTGA TTGCATCATT ATCACAACGA | 150 |
AAGAGAAGAA GAATACCTAG AGGAAGAGGA AACGAGAAGG CAGTGTTTGC | 200 |
ACCATCATCA CTACCAAACG ATGTTGTAGA GGAAATCTTC TTACGACTTC | 250 |
CGGTGAAAGC AATAATCCAA CTAAAGTCTC TCTCAAAACA ATGGAGATCG | 300 |
ACGATCGAGT CTCGCAGTTT TGAAGAGAGA CACTTGAAGA TCGTCGAGCG | 350 |
ATCACGCGTG GATTTTCCAC AGGTCATGGT CATGTCTGAA GAATATTCCT | 400 |
TGAAAGGAAG TAAAGGTAAT CAGCCTCGTC CAGATACAGA CATTGGTTTT | 450 |
AGTACAATCT GTTTGGAATC GGCTTCTATT CTGTCCTCCA CTCTTATCAC | 500 |
TTTCCCTCAA GGATTTCAAC ACCGGATCTA TGCTTCTGAA AGCTGTGACG | 550 |
GACTTTTCTG CATCCATTCC CTAAAAACAC AAGCCATATA TGTAGTTAAC | 600 |
CCGGCCACTC GGTGGTTTCG ACAACTTCCT CCGGCTAGGT TTCAGATTTT | 650 |
GATGCAAAAG TTATACCCCA CTCAAGACAC TTGGATTGAC ATAAAACCAG | 700 |
TAGTCTGTTA TACAGCATTC GTGAAGGCCA ATGATTACAA ATTAGTGTGG | 750 |
TTGTATAATT CTGATGCCTC GAATCCAAAC CTGGGAGTTA CAAAGTGCGA | 800 |
GGTTTTTGAT TTTAGGGCAA ACGCTTGGAG GTACTTGACT TGCACTCCAA | 850 |
GCTATCGGAT ATTCCCTGAC CAAGTACCAG CAGCTACAAA CGGGTCTATT | 900 |
TATTGGTTCA CGGAACCATA TAATGGCGAA ATAAAAGTGG TAGCTCTCGA | 950 |
TATTCACACT GAAACGTTTC GTGTGCTACC TAAGATTAAT CCGGCCATTG | 1000 |
CTAGTTCAGA TCCTGACCAT ATCGACATGT GCACTTTGGA TAATGGTTTG | 1050 |
TGCATGTCGA AAAGAGAATC GGATACGTTG GTCCAAGAGA TATGGAGGTT | 1100 |
AAAATCATCA GAAGACTCAT GGGAGAAGTT TGACATGAAC AGCGACGGTG | 1150 |
TTTGGCTTGA CGGCTCCGGT GAATCTCCGG AAGTTAATAA CGGTGAAGCT | 1200 |
GCGTCTTGGG TCAGAAACCC AGATGAAGAC TGGTTCAATA ACCCACCACC | 1250 |
ACCACAACAC ACTAATCAAA ACGACTTCAG ATTCAATGGT GGCTTTCCTT | 1300 |
TAAACCCCTC AGAGAATCTG CTTCTTCTTC TTCAGCAATC GATTGATTCT | 1350 |
TCTTCTTCTT CTTCTCCGTT ATTACATCCT TTCACACTCG ACGCTGCTTC | 1400 |
ACAGCAACAA CAACAACAAC AACAACAACA GGAACAGTCT TTCTTAGCTA | 1450 |
CGAAAGCTTG TATAGTTTCT CTTCTCAACG TCCCAACCAT CAATAACAAC | 1500 |
ACTTTCGATG ACTTCGGCTT TGACTCTGGT TTCTTAGGAC AACAATTCCA | 1550 |
TGGAAATCAT CAATCTCCGA ACTCGATGAA TTTCACTGGC TTAAACCACT | 1600 |
CAGTACCGGA TTTTCTTCCA GCTCCGGAAA ACAGCTCAGG ATCATGTGGA | 1650 |
TTGAGTCCTC TGTTCTCAAA CAGAGCAAAG GTTTTAAAAC CGTTACAGGT | 1700 |
AATGGCTTCA TCTGGCTCGC AGCCAACTCT GTTTCAGAAA CGAGCTGCAA | 1750 |
TGCGTCAGAG CTCGAGTAGC AAAATGTGCA ATTCTGAGAG TTCTTCTGAA | 1800 |
ATGAGGAAAT CGAGCTACGA GAGAGAGATT GACGATACTA GTACCGGAAT | 1850 |
CATCGATATC TCTGGATTGA ATTACGAATC TGATGACCAT AATACTAATA | 1900 |
ACAACAAAGG TAAGAAGAAA GGAATGCCTG CAAAGAATCT TATGGCTGAG | 1950 |
AGAAGAAGAA GGAAGAAGCT TAATGATAGG CTTTACATGC TTAGATCAGT | 2000 |
TGTTCCCAAG ATCAGCAAAA TGGATAGAGC ATCAATACTT GGAGATGCTA | 2050 |
TTGATTACCT CAAAGAGCTT TTACAAAGAA TCAACGATCT TCACACCGAA | 2100 |
CTTGAATCTA CTCCACCGAG TTCTTCAAGC TTGCATCCGT TAACACCGAC | 2150 |
TCCACAAACG CTGTCTTACC GTGTTAAGGA AGAGTTGTGT CCATCTTCCT | 2200 |
CCTTGCCAAG TCCTAAAGGC CAACAACCAA GAGTTGAGGT TAGATTAAGA | 2250 |
GAAGGAAAGG CAGTGAACAT ACACATGTTC TGTGGACGTA GACCAGGTCT | 2300 |
TTTACTTTCC ACCATGAGAG CTTTGGATAA CTTAGGATTG GATGTTCAAC | 2350 |
AAGCGGTGAT TAGCTGTTTC AATGGTTTTG CTTTGGATGT TTTCCGCGCT | 2400 |
GAGCAATGTC AAGAAGACCA TGACGTGTTA CCTGAACAAA TCAAAGCAGT | 2450 |
GCTTTTAGAT ACAGCAGGTT ACGCTGGTTT GGTTTGA | 2500 |
>AT1G12860.1 longest ORF length:828
MESREDSFIS KEKKSTMKKE KQAIASQRNR RRVIKNRGNG KRLIASLSQR | 50 |
KRRRIPRGRG NEKAVFAPSS LPNDVVEEIF LRLPVKAIIQ LKSLSKQWRS | 100 |
TIESRSFEER HLKIVERSRV DFPQVMVMSE EYSLKGSKGN QPRPDTDIGF | 150 |
STICLESASI LSSTLITFPQ GFQHRIYASE SCDGLFCIHS LKTQAIYVVN | 200 |
PATRWFRQLP PARFQILMQK LYPTQDTWID IKPVVCYTAF VKANDYKLVW | 250 |
LYNSDASNPN LGVTKCEVFD FRANAWRYLT CTPSYRIFPD QVPAATNGSI | 300 |
YWFTEPYNGE IKVVALDIHT ETFRVLPKIN PAIASSDPDH IDMCTLDNGL | 350 |
CMSKRESDTL VQEIWRLKSS EDSWEKFDMN SDGVWLDGSG ESPEVNNGEA | 400 |
ASWVRNPDED WFNNPPPPQH TNQNDFRFNG GFPLNPSENL LLLLQQSIDS | 450 |
SSSSSPLLHP FTLDAASQQQ QQQQQQQEQS FLATKACIVS LLNVPTINNN | 500 |
TFDDFGFDSG FLGQQFHGNH QSPNSMNFTG LNHSVPDFLP APENSSGSCG | 550 |
LSPLFSNRAK VLKPLQVMAS SGSQPTLFQK RAAMRQSSSS KMCNSESSSE | 600 |
MRKSSYEREI DDTSTGIIDI SGLNYESDDH NTNNNKGKKK GMPAKNLMAE | 650 |
RRRRKKLNDR LYMLRSVVPK ISKMDRASIL GDAIDYLKEL LQRINDLHTE | 700 |
LESTPPSSSS LHPLTPTPQT LSYRVKEELC PSSSLPSPKG QQPRVEVRLR | 750 |
EGKAVNIHMF CGRRPGLLLS TMRALDNLGL DVQQAVISCF NGFALDVFRA | 800 |
EQCQEDHDVL PEQIKAVLLD TAGYAGLV | 850 |