fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G12980 DRN, ESR1 ENHANCER OF SHOOT REGENERATION 1, DORNROSCHEN, Integrase-type DNA-binding superfamily protein (.1)

>AT1G12980.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
KpnI GGTAC|C 167
PvuII CAG|CTG 347
StyI C|C[AT][AT]GG 367


Click here to view TAIR data

>AT1G12980.1 length:987
ATGGAAAAAG CCTTGAGAAA CTTCACCGAA TCTACCCACT CACCAGACCC 
50
TAATCCTCTC ACAAAATTCT TCACTGAACC TACAGCCTCA CCTGTTAGCC 
100
GCAACCGCAA ACTGTCTTCA AAAGATACCA CTGTAACCAT CGCCGGAGCT 
150
GGCAGCAGCA CGACGAGGTA CCGCGGCGTA CGCCGGAGGC CGTGGGGACG 
200
ATACGCGGCG GAGATACGTG ACCCAATGTC GAAGGAGAGA CGTTGGCTCG 
250
GAACATTTGA CACGGCGGAA CAAGCCGCTT GTGCTTACGA CTCTGCGGCT 
300
CGTGCCTTTC GTGGAGCAAA GGCTCGTACT AATTTTACTT ATCCGACAGC 
350
TGTCATTATG CCTGAACCAA GGTTTTCTTT TTCCAACAAG AAATCTTCGC 
400
CGTCTGCTCG TTGTCCTCTT CCTTCTCTAC CGTTAGATTC CTCTACCCAA 
450
AACTTTTACG GTGCACCGGC AGCGCAGAGG ATCTATAATA CACAGTCTAT 
500
CTTCTTACGC GACGCCTCGT GTTCCTCTCG TAAAACGACT CCGTATAATA 
550
ACTCTTTCAA CGGCTCATCA TCTTCTTACT CAGCATCGAA AACGGCATGC 
600
GTTTCTTATT CCGAAAACGA AAACAACGAG TCGTTTTTCC CGGAAGAATC 
650
TTCTGATACT GGTCTATTAC AAGAGGTCGT TCAAGAGTTC TTGAAGAAAA 
700
ATCGCGGCGT TCCTCCTTCT CCACCAACAC CACCGCCGGT GACTAGCCAT 
750
CATGACAACT CTGGTTATTT CTCTAATCTC ACTATATACT CTGAAAATAT 
800
GGTTCAAGAG ACTAAGGAGA CTTTGTCGTC GAAACTAGAT CGCTACGGGA 
850
ATTTTCAAGC TAATGACGAC GGCGTAAGAG CCGTCGCAGA CGGTGGTTTA 
900
TCGTTGGGAT CAAACGAGTG GGGGTATCAA GAAATGTTGA TGTACGGAAC 
950
TCAGTTAGGC TGTACTTGCC GAAGATCGTG GGGATAG
1000

>AT1G12980.1 longest ORF length:328
MEKALRNFTE STHSPDPNPL TKFFTEPTAS PVSRNRKLSS KDTTVTIAGA 
50
GSSTTRYRGV RRRPWGRYAA EIRDPMSKER RWLGTFDTAE QAACAYDSAA 
100
RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ 
150
NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC 
200
VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH 
250
HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL 
300
SLGSNEWGYQ EMLMYGTQLG CTCRRSWG
350