Locus |
Common name |
Short description |
AT1G12980 |
DRN, ESR1 |
ENHANCER OF SHOOT REGENERATION 1, DORNROSCHEN, Integrase-type DNA-binding superfamily protein (.1) |
>AT1G12980.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
KpnI
| GGTAC|C |
167 |
PvuII
| CAG|CTG |
347 |
StyI
| C|C[AT][AT]GG |
367 |
Click here to view TAIR data
>AT1G12980.1 length:987
ATGGAAAAAG CCTTGAGAAA CTTCACCGAA TCTACCCACT CACCAGACCC | 50 |
TAATCCTCTC ACAAAATTCT TCACTGAACC TACAGCCTCA CCTGTTAGCC | 100 |
GCAACCGCAA ACTGTCTTCA AAAGATACCA CTGTAACCAT CGCCGGAGCT | 150 |
GGCAGCAGCA CGACGAGGTA CCGCGGCGTA CGCCGGAGGC CGTGGGGACG | 200 |
ATACGCGGCG GAGATACGTG ACCCAATGTC GAAGGAGAGA CGTTGGCTCG | 250 |
GAACATTTGA CACGGCGGAA CAAGCCGCTT GTGCTTACGA CTCTGCGGCT | 300 |
CGTGCCTTTC GTGGAGCAAA GGCTCGTACT AATTTTACTT ATCCGACAGC | 350 |
TGTCATTATG CCTGAACCAA GGTTTTCTTT TTCCAACAAG AAATCTTCGC | 400 |
CGTCTGCTCG TTGTCCTCTT CCTTCTCTAC CGTTAGATTC CTCTACCCAA | 450 |
AACTTTTACG GTGCACCGGC AGCGCAGAGG ATCTATAATA CACAGTCTAT | 500 |
CTTCTTACGC GACGCCTCGT GTTCCTCTCG TAAAACGACT CCGTATAATA | 550 |
ACTCTTTCAA CGGCTCATCA TCTTCTTACT CAGCATCGAA AACGGCATGC | 600 |
GTTTCTTATT CCGAAAACGA AAACAACGAG TCGTTTTTCC CGGAAGAATC | 650 |
TTCTGATACT GGTCTATTAC AAGAGGTCGT TCAAGAGTTC TTGAAGAAAA | 700 |
ATCGCGGCGT TCCTCCTTCT CCACCAACAC CACCGCCGGT GACTAGCCAT | 750 |
CATGACAACT CTGGTTATTT CTCTAATCTC ACTATATACT CTGAAAATAT | 800 |
GGTTCAAGAG ACTAAGGAGA CTTTGTCGTC GAAACTAGAT CGCTACGGGA | 850 |
ATTTTCAAGC TAATGACGAC GGCGTAAGAG CCGTCGCAGA CGGTGGTTTA | 900 |
TCGTTGGGAT CAAACGAGTG GGGGTATCAA GAAATGTTGA TGTACGGAAC | 950 |
TCAGTTAGGC TGTACTTGCC GAAGATCGTG GGGATAG | 1000 |
>AT1G12980.1 longest ORF length:328
MEKALRNFTE STHSPDPNPL TKFFTEPTAS PVSRNRKLSS KDTTVTIAGA | 50 |
GSSTTRYRGV RRRPWGRYAA EIRDPMSKER RWLGTFDTAE QAACAYDSAA | 100 |
RAFRGAKART NFTYPTAVIM PEPRFSFSNK KSSPSARCPL PSLPLDSSTQ | 150 |
NFYGAPAAQR IYNTQSIFLR DASCSSRKTT PYNNSFNGSS SSYSASKTAC | 200 |
VSYSENENNE SFFPEESSDT GLLQEVVQEF LKKNRGVPPS PPTPPPVTSH | 250 |
HDNSGYFSNL TIYSENMVQE TKETLSSKLD RYGNFQANDD GVRAVADGGL | 300 |
SLGSNEWGYQ EMLMYGTQLG CTCRRSWG | 350 |
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